Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0086 ATGAAACCGTGCTCGCCGACCAAGCCTCTTCTTCTGCTCTTTCTGCTGCTTCTCCGCCACCGCGCCGCCGTCGCTCTCTCCGATGATTCCAAAACCAAAAACACCTTCCGCGAGCGCGAGGCCTCCGATGACTCACTCGGATATCCTGAAATAGATGAGGATGCTCTTGTGAATTCGAAGTGTCCTAAGAATTTGGAGCTCAGATGGCAAACGGAAGTTAGTTCAAGCATCTATGCAAACCCCTTGATTGCTGATATTAACAGTGATGGGAAGCTTGAGGTCGTGGTTCCCTCTTTTGTTCACTACCTCGAGGTTCTAGAAGGTGCTGATGGGGACAAAATGCCAGGCTGGCCTGCTTTTCACCAATCAACTGTGCATTCTAGTCCTCTTCTATATGACATTGACAAAGATGGGGTGAGAGAAATAGCTTTGGCAACCTACAATGGTGAAGTGCTGTTTTTCAGGGTTTCGGGCTATTTGATGTCAGATAAGCTAGAGGTCCCACGTAGGAAGGTGCGAAAAGAATGGTTTGTGGGCTTGGATCCTGACCCAGTTGATCGTTCTCATCCTAGTGTTCATGATGACCAACTTGTCCAAGATGCTACCATCAAGAATTCTATGTCTCAAATGAATGGAAGTAGACATGAAGCTAAATCTTCAGTGGCCACATCAACCGAGAACCACCTTGACACAAAAAAACTGTCAAATCCTGAGCCAGAAAAGAAAATAAATGGAAGTCAAGTAGGTGAGAGCATGAAGGTGCCTAATCTTGAGCCAGAAATGAAAATAAATGGAAGTCAATTAGGTGAGAGCATGAAGGTGCCAAATCTTGAGCCAGAAAAGAAAATAAATGGAAGTCAAGTAGATGAGAGTATTAAGGTCCCTAATCTTGAGCCAGAAAAGAAAATAAATGGAAGTCAAGTAGATGAGAGTATTAAGGTCCCTGATCTTGAGCCAGAAAAGAAAATAAATGGAAGTCATGTACATGAGAGTATTAAGGTGCCACCAAATGTTGATCATTCCTCTGTGAATGCTGGGTCTCTGGAAACTGTTCACACAGATAATAAGAGCAGCACTGGGAGACGTTTGCTGGAAGATAACAATTCCAAAGGAGCAGAGCAAGGTGGTTCTGAATCCAAATACAAAGAGGGTGTTCGTGCTTCTACTGTGGAAAATGAGGAAGGCCTGGAAGCTGATGCTGATTCATCTTTTGAGTTACTCCGTAATAGCGAAGAGCTGGCTGATGAGTATAGCTATGATTATGATGATTATGTTGATGAAACAATGTGGGGTGATGAAGAATGGACTGAAGTTAAACATGATAAATTAGAGGATCATATAAATGTTGACTCTCACATCTTGTGCACTCCTGTCATTGCAGATATTGACAATGATGGTGTTTCAGAGATGATTGTTGCTGTTTCTTATTTCTTTGATCACGAGTATTATGACAACCAGGAGCATCGGAAAGAACTGGGTGATATTGACATTGGGAAATATGTTGCTGGTGGTATTGTTGTTTATAATCTGGATACGAAGCAAATTAAATGGACTGCAGATCTTGATCTGAGTACAGATACTTCAAACTTCCGAGCCTACATATATTCTTCCCCAACTGTTGTAGATTTGGATGGTGATGGGAATCTTGACATTCTCGTTGGAACCTCGTATGGCCTGTTTTATGTGCTGGATCATCATGGTAAGGTTAGAGAAAAGTTTCCTCTTGAGATGGCCGAGATTCAAGGATCTGTTGTTGCAGCTGATGTCAATGATGATGGGAAAATTGAACTAGTTACCGCTGATACACATGGAAATGTTGCTGTATGGACTTCAAAAGGAGATTTAGTGTGGGAAAAACATCTAAAGAGTCTTATTCCGCAGGGTCCAACTGTTGGTGATATTGATGGGGATGGCCATACTGAGCTTGTTGTGCCAACACTATCTGGGAAGATTCATGTTCTTGATGGAAGGGATGGGTCATCTATTGGGCGGTATCCATATCCAACTCATGGAAGAATAATGAATCAAATTCTTCTAGTTGATTTAAATAAGCCGAAGGAGAAAAAGAAGGGATTAACTATTGTTACCACATCATTTGATGGATATTTGTATCTCATTGATGGACCTACTGGATGTGCTGATGTTGTTGACATTGGTGAAACTTCGTATAGCATGGTCTTGGCAGACAATGTTGATGGTGGGGATGATCTTGATCTAATTGTCACAACTATGAATGGCAATGTCTTCTGCTTCTCAACTCCATCTCCTCATCATCCCCTAAAGGCATGGAGATTGCCTAGTCAAGGAAGAAACAACATTGCAAATCTGTACAATCGTGAAGGTATATATGTTACTCATCCTTACAGGGCCTTCCGTGACGAGGAAGGCAAAAGCTTTTGGGTGGAAATTGAGATTGTAGATGATTACAGATACCCATCTGGGCATCAAGGACCGTACAGAGTCACTACATCCTTGCTAGTACCTGGGAATTACCAAGGTGAGAGAACAATAAAGTTGAACAATACCTATGATCAACCTGGGAAATATCGGATTAAGCTGCCAACTGTGTCGGTAAGGACCACGGGAACAGTTTTGGTTGAGATGGTTGACAGAAATGGACTGTATTTCTTTGATGATTTCTCCCTTACATTCCATATGCACTACTATAAGCTGTTGAAGTGGCTTCTTGTACTTCCAATGCTTGGGATGTTTGGTGTGCTTGTAATCTTTCGCCCACAAGACTCGATGCCATTACCATCATTTTTGAGGAACATTGATTAA 2781 0.4207 MKPCSPTKPLLLLFLLLLRHRAAVALSDDSKTKNTFREREASDDSLGYPEIDEDALVNSKCPKNLELRWQTEVSSSIYANPLIADINSDGKLEVVVPSFVHYLEVLEGADGDKMPGWPAFHQSTVHSSPLLYDIDKDGVREIALATYNGEVLFFRVSGYLMSDKLEVPRRKVRKEWFVGLDPDPVDRSHPSVHDDQLVQDATIKNSMSQMNGSRHEAKSSVATSTENHLDTKKLSNPEPEKKINGSQVGESMKVPNLEPEMKINGSQLGESMKVPNLEPEKKINGSQVDESIKVPNLEPEKKINGSQVDESIKVPDLEPEKKINGSHVHESIKVPPNVDHSSVNAGSLETVHTDNKSSTGRRLLEDNNSKGAEQGGSESKYKEGVRASTVENEEGLEADADSSFELLRNSEELADEYSYDYDDYVDETMWGDEEWTEVKHDKLEDHINVDSHILCTPVIADIDNDGVSEMIVAVSYFFDHEYYDNQEHRKELGDIDIGKYVAGGIVVYNLDTKQIKWTADLDLSTDTSNFRAYIYSSPTVVDLDGDGNLDILVGTSYGLFYVLDHHGKVREKFPLEMAEIQGSVVAADVNDDGKIELVTADTHGNVAVWTSKGDLVWEKHLKSLIPQGPTVGDIDGDGHTELVVPTLSGKIHVLDGRDGSSIGRYPYPTHGRIMNQILLVDLNKPKEKKKGLTIVTTSFDGYLYLIDGPTGCADVVDIGETSYSMVLADNVDGGDDLDLIVTTMNGNVFCFSTPSPHHPLKAWRLPSQGRNNIANLYNREGIYVTHPYRAFRDEEGKSFWVEIEIVDDYRYPSGHQGPYRVTTSLLVPGNYQGERTIKLNNTYDQPGKYRIKLPTVSVRTTGTVLVEMVDRNGLYFFDDFSLTFHMHYYKLLKWLLVLPMLGMFGVLVIFRPQDSMPLPSFLRNID* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0086 926 MobiDBLite consensus disorder prediction 349 403 - -
Pvu10g0086 926 PANTHER PROTEIN DEFECTIVE IN EXINE FORMATION 1 10 925 - -
Pvu10g0086 926 MobiDBLite consensus disorder prediction 376 393 - -
Pvu10g0086 926 MobiDBLite consensus disorder prediction 303 324 - -
Pvu10g0086 926 Pfam FG-GAP-like repeat 588 644 IPR013517 -
Pvu10g0086 926 MobiDBLite consensus disorder prediction 207 230 - -
Pvu10g0086 926 MobiDBLite consensus disorder prediction 207 247 - -
Pvu10g0086 926 Gene3D - 404 758 IPR015943 GO:0005515
Pvu10g0086 926 PANTHER - 10 925 IPR045232 -
Pvu10g0086 926 MobiDBLite consensus disorder prediction 276 324 - -
Pvu10g0086 926 SUPERFAMILY Integrin alpha N-terminal domain 69 683 IPR028994 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0086 - - pvu:PHAVU_010G008300g 1845.09