Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0083 ATGATGATGGAAGGAGCCAGCAATGGAGGGATGCTGTACCACGAGGTGCAGGAGTCCAAGCTCTGTGCGGTGCATTGCGTCAACACCGTTTTGCAGGGTCCGTTCTTCTCGGAGTTCGATTTGGCCGCGCTCGCCTCTGATCTCGATCGCAAGGAGCGCCAGGTCCTGCTCCCCGCGCTCTCTTCTGCCGATTTCGAATCGCACAACGTGTCGCTCGATGGCGATTTCAGCATCCAGGTTTTACAAAAGGCTTTGGAAGTGTGGGACCTACAAGTTATCCCTCTTGACTCTCCAGTTGCTGAGCCTGCCCAGATTGACCCTGAGCTGGAAAATGCCTTCATTTGTCATCTACAAGACCATTGGTTTTGCATCCGTAAAGTGAATGGGGAGTGGTATAATTTTGACAGTCTCTATGCAGCCCCACAACACCTTTCCAAGTTTTACCTTTCTGCCTATCTCGACTCTTTGAAAGGCTTTGGGTGGAGCATATTCCTGGTTAGAGGAAATTTTCCAAAAGAATTCCCCATCTCCTCATCTGAAGCTTCTAATGGTTTTGGGCAGTGGCTTTCACCTGAAGATGCTGAGAGGATAACTAAATCTTGCAACTCCGTACAGGCTCCTCCTCATCAGAGAGTTAATGAGACCCAACAACACTATGATCAGTTTCTTTCTCATGGGGAAGCTGAAATGTTGTTAGACATGGAAGACGAGGATCTTAGGGCAGCAATTGCAGCCAGTCTGATGGATTCGTCCCCAACTGTGACCACTGCTGAGGCCAGTACTCCCCAAAATGATCATCAAAGTAGTAAACAAGTGGCCACCACTGAACCTACCCCTCTAAATGATCAAAACTCCAAACAAACAGTAACCACTGAAGCTACCCCTCTAAATGCTCAACAATCCAAACTAGTGGAACCCATTGAAGCCATTCTACCTCTCAATTCTCAAAGCAACAACCTCGTAGCAGCCATTGAAGCTGATTCTCAGAATGATCAAAACAGCAAAGAAGTGGCATCTACTATAGGCGATAACGCTGGAGATGAAAAGCAGAATAAAGGGAAAGGTGTCTAA 1071 0.4743 MMMEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRKERQVLLPALSSADFESHNVSLDGDFSIQVLQKALEVWDLQVIPLDSPVAEPAQIDPELENAFICHLQDHWFCIRKVNGEWYNFDSLYAAPQHLSKFYLSAYLDSLKGFGWSIFLVRGNFPKEFPISSSEASNGFGQWLSPEDAERITKSCNSVQAPPHQRVNETQQHYDQFLSHGEAEMLLDMEDEDLRAAIAASLMDSSPTVTTAEASTPQNDHQSSKQVATTEPTPLNDQNSKQTVTTEATPLNAQQSKLVEPIEAILPLNSQSNNLVAAIEADSQNDQNSKEVASTIGDNAGDEKQNKGKGV* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0083 356 SMART Josephin_2 16 169 IPR006155 GO:0004843|GO:0016579
Pvu10g0083 356 Gene3D - 21 171 - -
Pvu10g0083 356 PANTHER ATAXIN-3 1 318 - -
Pvu10g0083 356 MobiDBLite consensus disorder prediction 322 346 - -
Pvu10g0083 356 PANTHER ATAXIN-3-RELATED 1 318 IPR033865 GO:0004843|GO:0016579
Pvu10g0083 356 Gene3D - 35 73 - -
Pvu10g0083 356 MobiDBLite consensus disorder prediction 322 356 - -
Pvu10g0083 356 MobiDBLite consensus disorder prediction 250 297 - -
Pvu10g0083 356 ProSiteProfiles Josephin domain profile. 9 181 IPR006155 GO:0004843|GO:0016579
Pvu10g0083 356 Pfam Josephin 17 167 IPR006155 GO:0004843|GO:0016579
Pvu10g0083 356 PRINTS Josephin signature 13 36 - -
Pvu10g0083 356 PRINTS Josephin signature 107 126 - -
Pvu10g0083 356 PRINTS Josephin signature 128 148 - -
Pvu10g0083 356 PRINTS Josephin signature 152 171 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0083 K11863 - gmx:100776098 605.905