Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0082 ATGGGTTCCTCAGATCGGTTGTTCAACCGGCAAAGAACTCTCCATGAGATCCTTGGTGGTGGTCAAGTTGCAGATTTAATACTGTGGAGACGGAAGAACCTAACCATGGGGATATTGTTGGTCACACTAGCTGTTTGGGTTGTGTTTGAAAGATCTGGTTATACACTTCTGTCTCTTGTTTCCAATGTTTTCCTCCTCCTCATTGTCATTCTTTTCCTTTGGGCCAAGTCAGCTGCGATTCTCAACAGACCTGCACCACCTCTACCACAGTTGCACCTGTCAGAGGAAATGGCGAACGAAGTTACAACTTTTATCCGCACAAGAGTTAATGATTTGTTATCAGTTTCTCAAGATATTGCCCTTGGTAAAGATTCAAGGCTGTTCCTGAAAGTAGCTGCATACCTCTGGCTAATTTCTATTGTTGGTGGCTTCACTGATTTCCTTACCCTGGCATATACCAGTCTTTTTATTGTTCTTACAGTACCAGCAATCTATGAAAGATATGAAGAATACATAGACATGTATATTTTGAAGGGTTACAAAAATCTGTGCTTTTTACATGTGAAAATAAATGAGAAATATGTTAGCAGAGTCCACAACTGGATTCTGGAGAAGAAAAAGCTGAGCTGA 630 0.4079 MGSSDRLFNRQRTLHEILGGGQVADLILWRRKNLTMGILLVTLAVWVVFERSGYTLLSLVSNVFLLLIVILFLWAKSAAILNRPAPPLPQLHLSEEMANEVTTFIRTRVNDLLSVSQDIALGKDSRLFLKVAAYLWLISIVGGFTDFLTLAYTSLFIVLTVPAIYERYEEYIDMYILKGYKNLCFLHVKINEKYVSRVHNWILEKKKLS* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0082 209 PANTHER RETICULON 5 208 IPR045064 GO:0009617
Pvu10g0082 209 Pfam Reticulon 23 177 IPR003388 -
Pvu10g0082 209 ProSiteProfiles Reticulon domain profile. 23 209 IPR003388 -
Pvu10g0082 209 PANTHER RETICULON-LIKE PROTEIN B12 5 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0082 Pvu-Chr10 1190589 1193537 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0082 K20723 - gmx:100809125 369.007