Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0068 ATGGGTTTAGTATTTGGAAAAATCAGTGTGGAGACTGCAAAATACGAAGTGATCAAATCCACAAGCGAGTACGAAATCCGCAAATATGTACCCTGTGTAGTGGCTGAAGTCACATATGACCCATCACAGTTCAAGGAAAATAAAGATGGTGGCTTTATGGTTTTGGCCAGTTACATTGGTGCTGTGGGGAACCCCCAGAACACCAAGCCTGAAAAGATTGCAATGACTGCACCAGTTATAACCAAGGAGAGTGGTGGGGGTGGTGAGAAGATTGCTATGACAGCCCCAGTTGTGACAAAAGATGGTGCTGGTGAAGAAGGGAAGAAGAACAAGATGGTGACTATGCAGTTTGTTTTGCCAGCTGTGTATGGGAAAGCTGAGGAGGCGCCTAAACCTACTGATGAGAGGGTTCTGATAAAGGAAGAGGGTGAGAGGAAATATGGGGTGGTGAAGTTTGGAGGTGTGGCATCAGAGGAAGTGGTGAGGGAGAAGGTGGAGAAGCTGAGGGTGTGTTTGGAGACTGATGGGTTTAAGGTGGTTGGGGATTACGTGTTGGCCAGGTACAACCCACCTTGGACAATTCCTGTCTTCAGGACTAATGAGGTTATGATCCCAGTTGAATGA 624 0.4696 MGLVFGKISVETAKYEVIKSTSEYEIRKYVPCVVAEVTYDPSQFKENKDGGFMVLASYIGAVGNPQNTKPEKIAMTAPVITKESGGGGEKIAMTAPVVTKDGAGEEGKKNKMVTMQFVLPAVYGKAEEAPKPTDERVLIKEEGERKYGVVKFGGVASEEVVREKVEKLRVCLETDGFKVVGDYVLARYNPPWTIPVFRTNEVMIPVE* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0068 207 PANTHER - 2 207 - -
Pvu10g0068 207 Pfam SOUL heme-binding protein 88 205 IPR006917 -
Pvu10g0068 207 Pfam SOUL heme-binding protein 10 81 IPR006917 -
Pvu10g0068 207 SUPERFAMILY Probable bacterial effector-binding domain 4 82 IPR011256 -
Pvu10g0068 207 SUPERFAMILY Probable bacterial effector-binding domain 86 207 IPR011256 -
Pvu10g0068 207 Gene3D Regulatory factor, effector binding domain 87 207 IPR011256 -
Pvu10g0068 207 Gene3D Regulatory factor, effector binding domain 9 86 IPR011256 -
Pvu10g0068 207 PANTHER HEME-BINDING PROTEIN-RELATED 2 207 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0068 Pvu-Chr10 1078006 1078855 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0068 - - var:108347054 383.645