Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0065 ATGAGAGGATTGTTTCTTCCATGGAATCCATTGCGCTTCCACACTCTCACTTTTTCTTCCCTTCCAAACAGAGCCTTAACCCTCTCAGCTTCCGTGGAGTCCCTCTCTCAGGTGAGCGCGCGCGAGAGGAGGCGTGAGAAGAGCGAGAGAAGAGAGAGAAAGAGCGGCGCGAACTGGAAGGAGGAGGTGGAGATGAAACTCATCGAGAAGCCGAAGAAGAAAGGTTCGTGGATGGATGAACTGAACCTCGACAACCTCGCCAAGTTGGGTCTCCAATGGTGGGTCATTCGGGTTTCAAGGATTAAGGGTCACGACATCGCACAACTCCTCGCTCGCTCCCTCGCTATCCACTATCCCGACATCCAATTTAAGATTTATGTTCCATCTGTCAATGAGAAAAGGAGATTGAAGAATGGTTCCTTCTCTGTTAAACCAAGGCAATTGTTCCCAGGATGTGTTTTCTTGAGATGTGTGATGAACAAAGAACTACATGACTTCATAAGAGAGTATGATGGTGTTGGAGGATTTATTGGTTCCCAGGTTGGAAACACAAAGAGAATGATCAATAGACCTAAGCCATTATCTTCTGAAGATGTGGATGCAATCTTCAGACAAGCAAAAGAAGAACAAGAAAAAACTGACCAAGCTTTTGAGGAAGAAGAGAAAAAAGCTGCTCTAATAGCTGGGATTCGTAATACAGAATCAGAACCCCATGATGTTTTGAATGCTATTGTTGATACTAAATCTAAAAGGAGGAATAGGAAAACTTCTGACCAGGTCACAGGCACAAATGCCTCTTCTAATCGAAACAAATATAAACTCTTTGTGCCAGGTGCCACTGTTCTTGTTGTATCTGGAACCTTTTCAGGGTTTACAGGCACTCTCAAGAAGTTCAATCGAAAAACTAAAATGGCCACTGTGCATTTCACTCTATTTGGGAAAGAGAACATAGCAGACATAGATGTTAATGAAATTGATCTAGAGACAAATCATGGCCGGTAG 1002 0.4361 MRGLFLPWNPLRFHTLTFSSLPNRALTLSASVESLSQVSARERRREKSERRERKSGANWKEEVEMKLIEKPKKKGSWMDELNLDNLAKLGLQWWVIRVSRIKGHDIAQLLARSLAIHYPDIQFKIYVPSVNEKRRLKNGSFSVKPRQLFPGCVFLRCVMNKELHDFIREYDGVGGFIGSQVGNTKRMINRPKPLSSEDVDAIFRQAKEEQEKTDQAFEEEEKKAALIAGIRNTESEPHDVLNAIVDTKSKRRNRKTSDQVTGTNASSNRNKYKLFVPGATVLVVSGTFSGFTGTLKKFNRKTKMATVHFTLFGKENIADIDVNEIDLETNHGR* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0065 333 CDD NGN_plant 92 203 - -
Pvu10g0065 333 SMART kow_9 274 301 IPR005824 -
Pvu10g0065 333 CDD KOW_NusG 275 326 - -
Pvu10g0065 333 Pfam KOW motif 277 308 IPR005824 -
Pvu10g0065 333 Coils Coil 203 223 - -
Pvu10g0065 333 Pfam Transcription termination factor nusG 92 202 IPR006645 GO:0140673
Pvu10g0065 333 MobiDBLite consensus disorder prediction 247 266 - -
Pvu10g0065 333 PANTHER RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSG 22 327 IPR043425 -
Pvu10g0065 333 PANTHER TRANSCRIPTION ANTITERMINATION PROTEIN RFAH 22 327 - -
Pvu10g0065 333 SMART nusgn_4 90 206 IPR006645 GO:0140673
Pvu10g0065 333 Gene3D - 90 208 IPR036735 GO:0006355
Pvu10g0065 333 Gene3D - 274 326 IPR014722 -
Pvu10g0065 333 SUPERFAMILY Translation proteins SH3-like domain 275 325 IPR008991 -
Pvu10g0065 333 SUPERFAMILY N-utilization substance G protein NusG, N-terminal domain 91 208 IPR036735 GO:0006355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0065 - - gmx:100815839 496.893