Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0061 ATGGAACACAACACCAAAAGGGTTGTTTCTTCTAAATCTATATTTTTATGTGTGGTTTTCACCTTCAGCATTGTTGCTCCAGAAGCTGAGGCACGAGCATTTTTCGTGTTCGGTGATTCGCTTGTGGACAATGGGAATAACAACTACCTAGCCACCACTGCACGTGCCGATGGATATCCTTATGGCATTGACTCAGCCTCTCACAGAGCCTCTGGTCGTTTCTCCAATGGCCTCAACATGCCTGACCTTATCAGTGAGAAAATTGGGTCAGAACCCACATTACCATATCTGAGTCCAGAGCTGAATGGTGAAAAACTGCTTGTTGGTGCAAACTTTGCTTCTGCTGGAGTAGGAATTCTCAATGACACAGGATTTCAGTTTATAAACATTATCAGAATTAGAGAACAATTGGCATACTTCAGACAGTATCAGCAGAGGGTGAGTGCGTTAATCGGAGAAGAACAGAGTCGAGATTTAGTGGACAAGGCATTGGTTCTGATAACCTTAGGTGGCAATGATTTTGTGAACAACTATTTTTTGGTTCCTTTCTCTGCAAGATCTCGCGAATATGCTCTTCCAGACTACGTTGTCTTACTCATTTCTGAGTATCGTAAGATTCTTGTGGACCTGTATGAGTTGGGAGCACGACGGGTTCTTGTGACGGGAACGGGACCATTGGGTTGCGTGCCGGCAGAGTTGGCGATGCACAGCCGTAACGGAGAATGTGCGACGGAGCTGCAACGAGCCGTTAACATGTTCAATCCTCAACTTGTCCAACTCCTGCAAGAGCTCAACGCTCAAATTGGTTCCCACGTCTTCATTTCCGCAAACGCCTTCGCCATGCACTTGGATTTCGTCACTGACCCTCAAGCATATGGGTTTGTTACGTCAAAGGTTGCATGCTGTGGTCAGGGAGCATACAACGGAATCGGACTCTGCACTCCTGCTTCTAACTTGTGCCCCAACAGGAATCTCTACGCCTTTTGGGACGCTTTTCATCCATCGGAGACAGCAAACAGATTGATCGTTGATAAGTTCATGACAGGCTCCACCGACTACATGCACCCCATGAATCTTAGCACAATTCTTGCTTTAGATTCTACCACCTAA 1110 0.4622 MEHNTKRVVSSKSIFLCVVFTFSIVAPEAEARAFFVFGDSLVDNGNNNYLATTARADGYPYGIDSASHRASGRFSNGLNMPDLISEKIGSEPTLPYLSPELNGEKLLVGANFASAGVGILNDTGFQFINIIRIREQLAYFRQYQQRVSALIGEEQSRDLVDKALVLITLGGNDFVNNYFLVPFSARSREYALPDYVVLLISEYRKILVDLYELGARRVLVTGTGPLGCVPAELAMHSRNGECATELQRAVNMFNPQLVQLLQELNAQIGSHVFISANAFAMHLDFVTDPQAYGFVTSKVACCGQGAYNGIGLCTPASNLCPNRNLYAFWDAFHPSETANRLIVDKFMTGSTDYMHPMNLSTILALDSTT* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0061 369 Pfam GDSL-like Lipase/Acylhydrolase 35 345 IPR001087 GO:0016788
Pvu10g0061 369 Gene3D SGNH hydrolase 21 351 IPR036514 -
Pvu10g0061 369 CDD SGNH_plant_lipase_like 33 350 IPR035669 -
Pvu10g0061 369 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 1 365 - -
Pvu10g0061 369 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 365 - -
Pvu10g0061 369 SUPERFAMILY SGNH hydrolase 35 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0061 Pvu-Chr10 992658 996101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0061 33 363 Acyl Lipid Metabolism Gene Families AT4G10950 33.333 1.39e-57 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0061 - - gmx:100816078 657.521