Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0058 ATGGAAGCTTACACAAAGGGTTTTTGCCTCCTTGGCCTTCTAGTCTTTGTAAGCATTTCAGAGATTCATAGAGTGGCAGGTGCAGGAGAATGTGGGAGGTCTACTACCCCAGATAATGAAGCACTGAAGCTTATTCCTTGTGCCTCTGCAGCACAAGATGAAAATGCTAAAGTTTCTTCAAGTTGCTGTGCTCAGGTCCAGAAACTTGGCAAGAACCCTAGTTGTCTGTGTGCTGTTATGCTTTCCAACACAGCCAAGTTATCTGGAGCTGACCCTAAGGTTGCCGTAACCATCCCAAAACGCTGCAACCTTTCTACTCGCCCTGTTGGTTACAAGTGTGGACCTTACACTCTGCCTTAA 360 0.4639 MEAYTKGFCLLGLLVFVSISEIHRVAGAGECGRSTTPDNEALKLIPCASAAQDENAKVSSSCCAQVQKLGKNPSCLCAVMLSNTAKLSGADPKVAVTIPKRCNLSTRPVGYKCGPYTLP* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0058 119 Gene3D - 30 109 IPR036312 -
Pvu10g0058 119 SMART aai_6 31 113 IPR016140 -
Pvu10g0058 119 CDD AAI_LTSS 44 104 - -
Pvu10g0058 119 Pfam Probable lipid transfer 38 109 IPR016140 -
Pvu10g0058 119 PANTHER LIPID TRANSFER PROTEIN 6 119 - -
Pvu10g0058 119 PANTHER LIPID BINDING PROTEIN-RELATED 6 119 IPR039265 GO:0005504|GO:0009627
Pvu10g0058 119 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 40 109 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0058 Pvu-Chr10 967038 968816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0058 1 119 Acyl Lipid Metabolism Gene Families AT5G05960 58.824 6.18e-45 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0058 - - gmx:100306273 211.46