Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0052 ATGGCATTAGAACTTGTTGGTGGTGCTCTTCTTTCTGCTTTCCTTCAGGTTGCATTCCAGAAGCTAGCTTCTCCTCAAATTCTCGATTTCTTTCATGCAAGAAAGCTTGATCAAAATCTGCTCAACAAGTTGGAAATCAAGCTGCACTCCATCCATTCTTTGGCTGATGATGCAGAGCGAAAGCAGTTTACGGATCCTATTGTCAGAAACTGGCTGCTTAAGGTCAAAGATGCTGTCCTTAATGCAGAGGATCTCTTGGATGATATACAAATGCTCTCCAAAAGACAAGTAGATGCTGAATCTGAATCTCAAACCTCAGGCTGTACTTGTAAGGTACTCAATTTCTTCAAATCTTCTCCTATTACTATTAGTTCCCTTAACAAGGAAATTGAGTGTAAGATGAACCAAATCCTTAACTATTTAGAATTTCTCTCAAGCCTAAGGGGTGATCTAGGTTTGAAAACAGCAACCAGTTTTAGATCTAGGTCGAGTAATGAACTGCCACAAAAATCACAAACAACATCGTTGGTTGTTGGAACTGATATCTATGGCAGAGATCATGATAAAAGACTAATCATTGAATCACTGACATCTGACCTCAACGATCGTAACCAGCCATTAATACTTTCTATTGTGGGAATGGGAGGGGTGGGTAAGACCACTCTTGTTCAACATGTATTCAATGACTCATGGGCGGATGAAGCTAAATTTGATGTCAAAGCTTGGGTTTGTGTTTCAGAAGAATTTGATGTTTTCAAGATATCAAGAGCAATTCTTGAGGCAGTTACTAAATCAACTGATGATAGCAGAGATCTGGAGATGGTTCACAAAAAATTGGGAGAAAAATTGACGGGAAAGAAATTTCTTCTTGTTTTGGATGATGTTTGGAACGAAAACCAAACTAAGTGGGAGGAAGTGCGGAAGCCCCTTGTTTTAGGAGCCCAAGGGAGTAAGATTCTTGTTACCACACGCAGTAAGGAAGTTGCTTCTACCATGTGGTCAAAAGAATACTCCCTACAACAATTACAAGAAGATGATTGTTGGAAGTTGTTTGCTAAATATGCATTTCGAGGTGATGATACTCAACTAAATCCAGAGTGTAGGGATATTGGCATGAAGATTGTTAAAAAATGTAAAGGACTACCTCTCGCCTTGAAAACAATGGGAAGTATGTTATACAACAAATCATCTATTACAGAATGGAAAACTGTGTTCCAAAGTGAAATATGGGAATTTTCAAAAGAGCGTTGTGATATTATTCCTGCTTTAGCATTGAGCTATATCCACCTTCCTTCCCATCTAAAGGTGTGCTTTGCTTATTGTGCCTTATTCCCCAAGGATTATGAGTTTAAAAAGGAGGATTTGATTCAGTTATGGATGACTGAAAATTTCGCTCACTATCATCAACATAGTAGGACTCCAGAAGAAGTTTGCCAACAATACTTCAATGATCTACTATTAAGGTCCTTCTTCCAACAACCAGATGGAAATAAAGAAGTATTTCTCATGCATGACCTTCAACATGATTTGGCAACATATGTCGGTGGAGGCATATACTTCAGGTGCGAACTTGATCAAATAGAAAAGATACAAAAAGTAACTCGTCATTTTTCATTTGAACTTGGTTACCCCAAATGTTTTGATGGGTTTGGAACTTTATGTAATACAGAAAAGTTACGTACATTTGTGTCGATACATAGTTTCCTTTGGAGTATCAAAATGTCGATACATGAATTGTTCTCCAAGTTTAAGTTCATACGAATCTTATCTCTGTCTCATTGTTCTGACCTTCAAGAGTTACCTGACTCTGTTTCCAATCTTGAGCATCTCCGTTCCTTAGACCTCTCCCTTACTGCAATAAAAAAATTAACCGAAAAAATATGTTCACTCTCCCACTTGCAAATACTAAAGTTGAACTACTGTAGAGATTTGGAAGAGCTACCTTCAAATTTGCACTTACTCACCAATTTGTGTCGCCTTGAACTTATACAGACAAAAGTGAGAAAGATTCCACCGTGTTTGGGAAAATTGAAGAATCTTAAAGTAGTAATGAGTTCCTTTATTGTTGGCCATGGGAGGGAGTTTGGTGTTCAACTGATAGGAGAGCTCAACCTTGAGGGAATTCTATCAATTGAGGAGCTGCAGAATGTTGAGAATTCCGAGGACGCATTAACCGCGTATTTGAAGAATAAAACACACCTTGTGGCCCTGACCTTAGAATTGGGGTGGAATCGGAACTCTATTGATTCAAATAAAGAAGAGAAGGTAATTGAGAATCTGCAACCTTCCAAAAACTTAAAGGAGTTGTCAATCTTTAGGTATGGTGGAAAACAATTTCCAAATTGGTTACTAGGAAACTTATTGTGGAATATGGAGTCCTTAGTGTTGAATGAATGTGAATCTTGTGAATATTTACCTCCCCTTGGAATTTTGCCATTTCTCAAGTTCTTGAGAATTACAAAACTTGATGGGATAGTGAGTATTGATGGTGATTTTCATGGGAACAACTTTTGTTCATTTAAATCCCTTGAAACATTGGAGTTCTCCAATATGATTCGATGGGAAAAGTGGGACTGCGAAGCTGTGACAAATGCTTTTCCACGTCTACGACATCTTTCCATAAGAAATTGTCCGGAGCTGAAAGGAGAACTGCCAAAGCAACTTATTACTTTGGAAACACTAGAAATTGAAGACTGCCAACAACTTGAGGCTTCCGTTCTAAGGGCTCACGATGAAAAGCTGCAGTTAGAGTGGGGTACAATGAAAAGCCTCACAATGACAACATCATTACATGAAATTGTTGGGTTATCCGACACTCTTGAAAACTTGCAGATTGATTCACCCTTGGAGTCAATCAAAGATGATTGTGTCTCTGTACGAAGCTTTCCACTGGATTTGTTCCCAACACTCAGGACGCTTACTCTCAGTAGGTTTGATAATCTAGAGATGATTTCACAGAGTCTCGTCAATAATCATCTAGAGGAGTTAACACTCAACTATTGTCCTAAATTAGAATCATTGCCTGGAAGCATGCATATGTTGCTTCCATCTTTGAGGAAGTTATCCATAAGAGACTGTCCAGGACTAAAGACGTTCCCTGACAAAGGTTTCCCATCAGAACTCAAGGATCTGACAATCATAAATTGCTCTAGACTTGTTGGCTCACTGAAAGGAGTTTTCACAGACAGTCCTTCTTTGAAAACCTTGAGAATTCATGGAGTAGATGCAAAATGTTTTCCAGATGAAGGTTTGCTTCCACCCTCTCTTACTTCTCTAATCATCTATGATTGTCCAAATCTAGAAAAATTGGACTACAAGGGTCTCCATCAACTCTCATCCCTTCAGAAGTTGAATCTTAACAAGTGCCCCAATCTCCAACACCTACCTGAGGAGGGTCTTCCCAAATCAATTTCATATCTTAATATTCGTGGTTGTCCTTTGCTAGAACCGCGTTGTCAGGAAGAAGGAGGTGAAGACTGGAAAAAGATTGCGCACATTAAAATTTTGTTTATACGACAATGA 3522 0.387 MALELVGGALLSAFLQVAFQKLASPQILDFFHARKLDQNLLNKLEIKLHSIHSLADDAERKQFTDPIVRNWLLKVKDAVLNAEDLLDDIQMLSKRQVDAESESQTSGCTCKVLNFFKSSPITISSLNKEIECKMNQILNYLEFLSSLRGDLGLKTATSFRSRSSNELPQKSQTTSLVVGTDIYGRDHDKRLIIESLTSDLNDRNQPLILSIVGMGGVGKTTLVQHVFNDSWADEAKFDVKAWVCVSEEFDVFKISRAILEAVTKSTDDSRDLEMVHKKLGEKLTGKKFLLVLDDVWNENQTKWEEVRKPLVLGAQGSKILVTTRSKEVASTMWSKEYSLQQLQEDDCWKLFAKYAFRGDDTQLNPECRDIGMKIVKKCKGLPLALKTMGSMLYNKSSITEWKTVFQSEIWEFSKERCDIIPALALSYIHLPSHLKVCFAYCALFPKDYEFKKEDLIQLWMTENFAHYHQHSRTPEEVCQQYFNDLLLRSFFQQPDGNKEVFLMHDLQHDLATYVGGGIYFRCELDQIEKIQKVTRHFSFELGYPKCFDGFGTLCNTEKLRTFVSIHSFLWSIKMSIHELFSKFKFIRILSLSHCSDLQELPDSVSNLEHLRSLDLSLTAIKKLTEKICSLSHLQILKLNYCRDLEELPSNLHLLTNLCRLELIQTKVRKIPPCLGKLKNLKVVMSSFIVGHGREFGVQLIGELNLEGILSIEELQNVENSEDALTAYLKNKTHLVALTLELGWNRNSIDSNKEEKVIENLQPSKNLKELSIFRYGGKQFPNWLLGNLLWNMESLVLNECESCEYLPPLGILPFLKFLRITKLDGIVSIDGDFHGNNFCSFKSLETLEFSNMIRWEKWDCEAVTNAFPRLRHLSIRNCPELKGELPKQLITLETLEIEDCQQLEASVLRAHDEKLQLEWGTMKSLTMTTSLHEIVGLSDTLENLQIDSPLESIKDDCVSVRSFPLDLFPTLRTLTLSRFDNLEMISQSLVNNHLEELTLNYCPKLESLPGSMHMLLPSLRKLSIRDCPGLKTFPDKGFPSELKDLTIINCSRLVGSLKGVFTDSPSLKTLRIHGVDAKCFPDEGLLPPSLTSLIIYDCPNLEKLDYKGLHQLSSLQKLNLNKCPNLQHLPEEGLPKSISYLNIRGCPLLEPRCQEEGGEDWKKIAHIKILFIRQ* 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0052 1173 SUPERFAMILY L domain-like 503 900 - -
Pvu10g0052 1173 Gene3D - 341 425 IPR042197 -
Pvu10g0052 1173 Coils Coil 41 61 - -
Pvu10g0052 1173 Gene3D - 426 513 IPR036388 -
Pvu10g0052 1173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 441 IPR027417 -
Pvu10g0052 1173 Pfam Rx N-terminal domain 11 99 IPR041118 -
Pvu10g0052 1173 Gene3D Ribonuclease Inhibitor 546 915 IPR032675 -
Pvu10g0052 1173 Gene3D Ribonuclease Inhibitor 916 1170 IPR032675 -
Pvu10g0052 1173 Gene3D - 164 338 IPR027417 -
Pvu10g0052 1173 Coils Coil 82 102 - -
Pvu10g0052 1173 Gene3D - 20 122 - -
Pvu10g0052 1173 SUPERFAMILY RNI-like 834 1155 - -
Pvu10g0052 1173 Pfam NB-ARC domain 192 406 IPR002182 GO:0043531
Pvu10g0052 1173 PANTHER OS05G0414200 PROTEIN 13 1007 - -
Pvu10g0052 1173 PANTHER OS05G0414200 PROTEIN 898 1129 - -
Pvu10g0052 1173 PRINTS Disease resistance protein signature 208 223 - -
Pvu10g0052 1173 PRINTS Disease resistance protein signature 282 296 - -
Pvu10g0052 1173 PRINTS Disease resistance protein signature 378 392 - -
Pvu10g0052 1173 PRINTS Disease resistance protein signature 581 597 - -
Pvu10g0052 1173 PANTHER DISEASE RESISTANCE PROTEIN RP 898 1129 IPR044974 GO:0006952
Pvu10g0052 1173 PANTHER DISEASE RESISTANCE PROTEIN RP 13 1007 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0052 Pvu-Chr10 836962 840690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0052 551 680 Miscellaneous Gene Families AT4G39270 35.338 6.84e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0052 - - pvu:PHAVU_010G004600g 1552.34