Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0050 ATGGCCTTAGAACTTGTTGGTGGTGCTCTTCTCTCTGCTTTCCTTCAGGTTGCATTCGACAAGTTAGCTTCTCCTCAAATTCTCGATTTCTTTCATGCAAGAGAGCTTGATCAAAAGCTGCTCAACAAGTTGGAAACCAAGATGCACTCCATCCATTCTCTGGCTGATGATGCAGAGCGAAAGCAGTTCACGGATCCACATGTCAGAAACTGGCTGCTTAAGGTCAAAGATGCTGTCCTTAATGCCGAGGATCTCTTGGATGATATACAAAAGATCTCCAAAAGACAAGATGCTGAATCTGAATCTCAAACCTCAGGCTGTACTTGCAAGGTACTCAATTTCTTCAAATCTTCTCCTATTACTATTAGTTCCCTTAACAAGGAAATTGAGTGTAGGATGGAACAAATCCTTGATGATTTAGAATTTCTCTCAACCCAAAGGGGTGATCTAGGATTGAAAATCGCTGGCGGTGTTGGATCTGGGTTGAGTAATGATCTGTCACAAAAATCACAAACAACATCGTTGGTTGTTGGAACTGATATCTATGGCAGAGATGATGATAAAAGACTGATCATTGATTGGCTGACTTCTGACATCAATTGTGGTAACCAACCATCAATAATTTCTATTGTGGGAATGGGTGGAGTGGGTAAGACCACTCTCGCTCAACATGTATTCAATGACCTGAGGGTGGATGAGGCTAAATTTGATGTTAAAGTTTGGGTTTGTGTTTCAGATGAATTTGATGTTTTCAAGATATCTAGAGCAATTCTTGAGGCAGTTACTAAATCAACCGATGATAGTAGAGATCTGGAGATGGTCCATAGAAGAATGAAAGAAGAATTGACGGGAAAGAAATTTCTTCTTGTTTTGGATGACGTTTGGAACGAAAACCAACCTAAATGGGAGGAAGTGCAGAAGCCCCTTGTTTTAGGAGTCCAAGGGAGTAAGATTCTTGTGACCACACGTAGTAAGGAAGTTGCTTCTACCATGCGTTCAGAAGAATACTCCCTACAACAATTACAAGAAGATGATTGTTGGAAGTTGTTTGCTAAACATGCATTTCGAGGTGATTGTACTCAACTAAACCCAGAGTGCAAGAAGATTGGAATGAAGATTGTTAAGAAATGTAAAGGATTACCTCTCGCCTTGAAAACAATGGGAAGTATGTTATACAACAAATCATCTGTTTCAGAGTGGAAAACTGTGCTCCAAAGCGAAATATGGGAATTTTCAAAAGAGCGTTGTGATATTATTCCCGCTTTAGCATTGAGCTATATCCACCTTCCTTCTCATCTCAAGGTATGCTTTGCTTACTGTGCCTTATTCCCCAAGGATTATGAGTTAGAAAAGAAGGAGTTGATTCAGTTGTGGATGACTGAAAATTTTGCACATTGTCATCAACATAGTAGGACTCCAGAAGAAGTTTGCCAACAATACTTCAATGATCTACTATCAAGGTCCTTCTTCCAACAACCAAATGAAAATAAAGAAGTATTTATCATGCATGACCTTCTACATGATTTGGCAAAATATGTCGGTGGAGGCCTATACTTTAGGTGTGAACTTGATCAAACAGAAAAGATACAGGAAGTAGCTCGTCATATTTCATTTGAATTTCAACACAAACAATATTTTGATGGGTTTGGAACTTTATGTAATACAAAAAGGTTACGTACATTTATGCCAAATGCTAGTAGCCTAAATTATTTGTGGAGTTGGGATATCAAAATGTCGATAGATGAATTGTTCTCGAAGTTTAAGTTCATACGTATCTTATCTCTATCTCATTGCTCTGACCTTCAAGAGTTACCTGATTCTTTTGGTAATCTTGAGTATCTCCGTTCCTTAGACCTTTCCCATACTATGATAAAAAGATTGACTGAAAAGATATGTTCACTCTCCCACTTGCAAATACTGAATTTGAACTACTGTATACATTTGGAAGAGTTGCCCTCAAATTTGCATTTATTAAGCAATTTGTGTCGCCTTGAATTAAAAGAGACGAAAGTGAGAAAGGTGCCACCGCATTTGGGAAAACTGAAGAATCTTAAAGTAGTAATGAATTCCTTTAATGTTGGCCTTAGCAAAGAGTTGGGTATTCAACAGCTAAGAGAGATCAACCTTGATGGAAGCATATCAATTGGGGAGCTGCAGAACATTGAGGATTCCACGGAAGCATTAGAAGCAGATTTGAAGAATAAAACACACCTTGTGGAGCTGAGCTTGGGATGGGGGAGGAATGGGAACTCTATTGATTCAAAAAAAGAAGAGGACACAATTGAGAATCTGCAACCTTCCAAAAACTTAAGGAAGTTGTCAATTTTTAAGTATGGCGGGAAACAATTTCCAAATTGGTTACTGGATAAGTCATTTTTGAATTTGGTGTTCTTAGAGTTAGATAAATGTGAATCTTGCCAACGTTTACCTCCGCTTGGTCTTTTGCCTTATCTGAAGAGGCTGAAGATTTCAGGGTTTGATAAAATAGTGAGTGTTGATGGTGATTTTCATGGGAACAACTCTTGTTCATTTAAATCCCTAGAAATATTGGACTTCTCCCATATGAGTCAATGGGAAAAGTGGGACTGCCAAGTTGTGATAGGTGCCTTTCCACGTCTAATAAGGCTTTTCATATCAAATTTGTTGGATGAATGTGAATTTTGTGAACGTTTACCTCCCCTTGGACTTTTGCCATTTCTGAAGGTCTTGAAGATTATAAAACTTGATGGCGTAGTGAGTATTGTTGATGGTGATTTTCATGGGAACAACATTTCTTCATTTAAATCCCTTGAAACATTGCACTTCTCCTATATGCGTCAATGGGAAAAATGGGATTGTCAAGCAGATGCTTTTCCACGTCTACGAGATCTTTCCATAAGAAAATGTCCAAAGCTGAAAGGACAGTTGCCAAAGCAACTTATTCCTCTGGAAAAACTACAAATTAAAGACTGCCAACAACTTGAGGCTTTCGCTCCTAGGGCTCTAGATTTACAACTACGTAATTGTGGAAAACTGCAGTTAGAGTGTGGTACAATGAAAAGGCTCACAATGGAAACATCATTGTTTGAAATTGTTGGGTTGTACGACACTCTTGAAGACTTGTACATTGATTCACCCTTGGAGTCAATCAATGATGGTTGTATCTCTCTACGAAGCTTTCCACTGGATTTGTTCCCAAAACTCAAGACGCTTGCTCTCAGTGGGTTTGATAATCTAGAGATGATTTCACAGAGTTTCGTCCATAATCATCTAGAACACCTAAAACTCGAGTATTGTCTTAAATTTGAATCATTGCCTGGAAGCATGCATATGCTGCTTCCATCTCTCAGGAGTTTATCGATAAGAGACTGTCCAAGACTTGAGTCGTTCCCTGACGGAGGCTTGCCATCAAATCTAGAAGAGCTGGAAATCAGTAAGTGCTCTAGACTTGTTGGGTCACTGAAAGGAGCTTTCAGAGATAGTCCTTCTTTGAAAATATTAGAGATTGATGAAGTGGATGCAAAATGTTTTCCAGATAAGGGTTTGCTTCCACTCTCTCTTACTTTTCTAATTATCTCTCATTGTCCAAATTTAGAAAAACTGGACTACAAGGGTCTCCATCTTGGACTGTTTGAGTAG 3618 0.3875 MALELVGGALLSAFLQVAFDKLASPQILDFFHARELDQKLLNKLETKMHSIHSLADDAERKQFTDPHVRNWLLKVKDAVLNAEDLLDDIQKISKRQDAESESQTSGCTCKVLNFFKSSPITISSLNKEIECRMEQILDDLEFLSTQRGDLGLKIAGGVGSGLSNDLSQKSQTTSLVVGTDIYGRDDDKRLIIDWLTSDINCGNQPSIISIVGMGGVGKTTLAQHVFNDLRVDEAKFDVKVWVCVSDEFDVFKISRAILEAVTKSTDDSRDLEMVHRRMKEELTGKKFLLVLDDVWNENQPKWEEVQKPLVLGVQGSKILVTTRSKEVASTMRSEEYSLQQLQEDDCWKLFAKHAFRGDCTQLNPECKKIGMKIVKKCKGLPLALKTMGSMLYNKSSVSEWKTVLQSEIWEFSKERCDIIPALALSYIHLPSHLKVCFAYCALFPKDYELEKKELIQLWMTENFAHCHQHSRTPEEVCQQYFNDLLSRSFFQQPNENKEVFIMHDLLHDLAKYVGGGLYFRCELDQTEKIQEVARHISFEFQHKQYFDGFGTLCNTKRLRTFMPNASSLNYLWSWDIKMSIDELFSKFKFIRILSLSHCSDLQELPDSFGNLEYLRSLDLSHTMIKRLTEKICSLSHLQILNLNYCIHLEELPSNLHLLSNLCRLELKETKVRKVPPHLGKLKNLKVVMNSFNVGLSKELGIQQLREINLDGSISIGELQNIEDSTEALEADLKNKTHLVELSLGWGRNGNSIDSKKEEDTIENLQPSKNLRKLSIFKYGGKQFPNWLLDKSFLNLVFLELDKCESCQRLPPLGLLPYLKRLKISGFDKIVSVDGDFHGNNSCSFKSLEILDFSHMSQWEKWDCQVVIGAFPRLIRLFISNLLDECEFCERLPPLGLLPFLKVLKIIKLDGVVSIVDGDFHGNNISSFKSLETLHFSYMRQWEKWDCQADAFPRLRDLSIRKCPKLKGQLPKQLIPLEKLQIKDCQQLEAFAPRALDLQLRNCGKLQLECGTMKRLTMETSLFEIVGLYDTLEDLYIDSPLESINDGCISLRSFPLDLFPKLKTLALSGFDNLEMISQSFVHNHLEHLKLEYCLKFESLPGSMHMLLPSLRSLSIRDCPRLESFPDGGLPSNLEELEISKCSRLVGSLKGAFRDSPSLKILEIDEVDAKCFPDKGLLPLSLTFLIISHCPNLEKLDYKGLHLGLFE* 1206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0050 1205 PANTHER OS05G0414200 PROTEIN 13 880 - -
Pvu10g0050 1205 PANTHER OS05G0414200 PROTEIN 882 972 - -
Pvu10g0050 1205 Coils Coil 41 61 - -
Pvu10g0050 1205 Gene3D - 340 424 IPR042197 -
Pvu10g0050 1205 Gene3D Ribonuclease Inhibitor 882 1006 IPR032675 -
Pvu10g0050 1205 Coils Coil 126 146 - -
Pvu10g0050 1205 SUPERFAMILY L domain-like 502 984 - -
Pvu10g0050 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 440 IPR027417 -
Pvu10g0050 1205 Gene3D Ribonuclease Inhibitor 545 881 IPR032675 -
Pvu10g0050 1205 Gene3D - 19 121 - -
Pvu10g0050 1205 Gene3D Ribonuclease Inhibitor 1023 1203 IPR032675 -
Pvu10g0050 1205 PANTHER DISEASE RESISTANCE PROTEIN RP 13 880 IPR044974 GO:0006952
Pvu10g0050 1205 PANTHER DISEASE RESISTANCE PROTEIN RP 882 972 IPR044974 GO:0006952
Pvu10g0050 1205 Pfam NB-ARC domain 186 405 IPR002182 GO:0043531
Pvu10g0050 1205 Gene3D - 425 512 IPR036388 -
Pvu10g0050 1205 PRINTS Disease resistance protein signature 207 222 - -
Pvu10g0050 1205 PRINTS Disease resistance protein signature 281 295 - -
Pvu10g0050 1205 PRINTS Disease resistance protein signature 377 391 - -
Pvu10g0050 1205 PRINTS Disease resistance protein signature 585 601 - -
Pvu10g0050 1205 SUPERFAMILY RNI-like 922 1200 - -
Pvu10g0050 1205 Gene3D - 164 339 IPR027417 -
Pvu10g0050 1205 Coils Coil 718 738 - -
Pvu10g0050 1205 Pfam Rx N-terminal domain 11 102 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0050 Pvu-Chr10 825816 834951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0050 549 799 Receptor kinase-like Gene Family AT4G13920 24.419 1.04e-09 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0050 - - pvu:PHAVU_010G004600g 1460.66