Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0049 ATGAAGAAAAAAGGAGGCTCGGTAGATGACCGCTCCCGGTACACACGGTCCTCCAAAGAGCAAGGACCGAACGCCAACAAGGATTCCTCGGCCGAAGCCTTCAAGACAGGAACCTCATCCAAAAATTCGGCAACAGAAGTGTCGGTAAGAAAAGAGGACGACACCTCACATACCCGGGGATCTACCCAGGCCGGCCCCACATGGGGTCGCGGCCCCTCAAAAGGGGCCGAGCGGTCCGACGCATTACCAGCGTCTTCCCTCACCAAGCCTGGAGAAGGAACCCTCTGCACGTCCCCGACCGGGGAAGCCTGGCCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGACGAAGAAGAAGACGAGCAAGCCGGGGGAGACTCGGCAAGAGCAGACATAACTAACCTTGAAAACGAACGAGGAAAGCAACTAAGAGCGGTCGGTTTGATTCGAGGTGTCGGAGCTCAAGCAAAGATAACGCGTGGAACGCTACTATTCCCAGCCCCTATTTATAGCCCGGGAGGGCCTCGGAATCCCAAACGTCACAAGAACCCCAACCGTTGGATTCGTTTGATCCAACGGTTCGCATCGCTTCGCGCCCAGAAAAACCCCTCATTAATGCGCGTCACGTCAATCACTCAGACGCCCCCAAACATCACTTCACTCATCATTACACCGTCCGCCCGGGACCCATTCTTCAGACTCTTCGGCTGTACCATCTCTAGAGCCTGGGAGGCAACTTTGCACTCCATCCATTCTCTGGCGGATGATGCAGAGCGAAAGCAGTTCACGGATCCACATGTCAGAAACTGGCTGCTTAAGGTCAAAGATGTTGTTCTTGATGCAGAGGATCTCTTGGATGATATACAAAATCTCTCCAAAAGACAAGATGCTGAATCTGAATCTCAAACCTCAGGATGTATTTGCAAGGTACTCAATTTCTTCAAATATTCTCCTATTAGTTCCCTTAACAAGGAAATTGAATGTAAGATGGAACAAATCCTTGAAGATTTAGAATTTCTCTCAAGCCAAAGGGGTCATCTAGGATTGAAAACAGCTACCGGTGTTGGATATGGGTTGAGTAATGAACTGCCACAGCAATCACAAACAACATCTTTGGTTGTTGGAACTGATATTTATGGCAGAGATGATGATAAAGAACTGATCTTTAAGTGGCTGACATCTGACATCAACGATCGTAACCAGCCATCAATACTTTCTATTGTGGGAATGGGAGGGATGGGTAAGACCACTCTTGCCCAACATGTATTCAATGACCCAAGGATGAATGAGGATAAATTTGATGTCAAAGCTTGGGTTTGTGTTTCAGATGAATTTGATGTTTTCAAGGTATCAAAAGCAATTCTTGAGCATGTTACTTCATCTACGGATGACAGTAGAGATACAGAGATGGTTCACATAAGATTGAAAGAAAATTTGACAGGGAAAAGGTTTCTTCTTATTTTGGATGATGTTTGGAACGAAACCCAACCTAAATGGGAGGAAGTGAGGAAGCCCCTTCTTTTAAGGGCCAAAGGGAGTAAGATTCTTGTCACCACACGTAGTAAGGAAGTTGCTTCTACCATGTGGTCAGAAGAATACTCCCTACAACAATTACAAGAAGATCATTGCTGGAAGTTGTTTGCTAAACATGCATTCCGAGATGATGGTACTCAACCAAATCAAGAGTGTAGGGAGATTGGCATGAAGATTGTTAAAAAATGTAAAGGACTACCTCTCGCCTTAAAAACAATGGGTAGTCTATTGTACAACAAATCATCTTTTTCAGAATGGCAAACTGTGTTCCGAAGCGAAATATGGGAATTTTCAAAAGAGCGTTGTGATATTATTCCTGCTTTAGCATTGAGCTATATCCACCTTCCTTCCCATCTCAAGGTATGCTTTGCCTACTGTGCCCTATTCCCCAAAGATTATGAGTTTAAAAAGGAGGATTTGATTAAGTTGTGGATGACTGAAAATTTTGCCCAGTGTCGTTCACATAGTAAGACTTCAGAAGAAGTTTGCCAACAATACTTCAATGATCTACTATCAAGGTCCTTTTTCCAACAACCAGATGAAAATAAAGAAGAATTTGTAATGCATGACCTTCTATATGATTTGGAAAAATATGTCGGTGGGGGCCTATACTTCAGGTGCGAACTTGATCAAACAGAAAAGGTACAAAAAGTAACTCGTCATTTTTCAGTCGAAGTTAAATACAGACAATATTTCGATGGGTTTGGAACTTTATGTAATATAGAAAGGTTACGTACATTTATGGCAAAAGATGGGAGCCTAAGTTATTTCAAAATGTCGATCCATGAATTGTTGTCCAAGTTTAAGTTCTTACGTGTCTTATCTTTGTCTGATTGTTCTGACCTTGAAGAGTTACCTGACTCTGTTGCCAATCTTGAGCATCTTCGTTCCTTCGACCTCTCGGGTACTGCAATGAAAAAATTAAGCGAAAAGATATGTTCACTCTCCCACTTGCAAATACTGATGTTGAACCACTGTACATATTTGGTGGAGCTACCCTCAAATTTGCATTTACTCACCAATTTGTGTCACCTTGAACTTAGACTGACAAATGTGACAAAGATGCCACCGTATTTGGGAAAATTGAAGAATCTTAAAGTAGTAATGAGTTCCTTTAATGTTGGCCATGGCTTTCAACAGTTAGGAGAGCTCAACCTTGAGGGAAGTCTATCAATTGAGGAGCTGCAGAATGTTGAGAATTCCTTGGATACATTAAAAGCAGATTTGAAGAATAAAACAGACCTTGTGGCGCTAACCTTAAATTGGGGGTGGAATCAGAACTCTATTGATTCAAAAAAAGAAGAGGACGTAATTGAGAATCTGCATCCTTCTAAAAACATAAAGGAGTTGTCAATCTATGGATATGGTGGAAAACGATTTCCAAATTGGTTACTAGAAAATTCATTGTGGAATATGGTGTCGTTATTGTTGAATCAATGTGAATCTTGCCAACGTTTACCTCCCCTTGGACTTTTGCCATTTCTCAAGGTCTTGAGTATTATAAAACTTGATGGGATAGTGAGTATTGATGGTGATTTTCATGGGAACAACTCTTCTTCATTTAAATCCCTTGAAACATTGGAGTTTTCATCTCTGAGTCGATGGGAAAAGTGGGATTGCCAAGCAGTGACAAATGCTTTTCCACGTCTACGACATCTTTCCATAAGAAAATGTCCAAAGCTGAAAGGGCAGCTTCCAGAGCAACTTATTCCTTTGGAAATGCTACAAATTAAATACTGCCAACAACTTGAGACTTTCGCTCCTAGGGCTCTGGATTTACAACTAAGTGATTGTGGAAAGCTGCAATTAGAGTGGGGTACAATGAAAAGCCTCACAGTGGAAACATCATTGCTGGAAATTGTTGGATCGTCTGACACTCTTGAGAACTTGCAGATTGATTCTCTCTATGATGATGGTGTCTCTTTACAAAGCTTTCCACTAGATTTATTCCCAAAGCTCAGGAAGCTTGATCTCAGCGGGTTTGATAATCTAGAGATGATTTCACAGAGTCTCATCCATATTCATCTAGAACACCTAACACTCAAGTATTGTCATAAATTAGAATCATTGCCTGGAAGCATGCATATGTTGCTTCCATCTCTGAGGACGTTATGGATACAAGGTTGTTCAGTACTGAAGTCATTCCCTGACGGAGGTTTCCCATCAAATCTTGAGAGTCTGGTAATAGAAGACTGTTCAGAACTTGAGTCATTCCCTCGCGAAGGTTTCCCATCAATTCTCAAGCGTTTATTAATAAAATATTGTCCAAGACTTAAGTCGTTCCCTCACAGAGGTTTCCCATCAAATCTCCATACTCTGAGAATAGAAGGTTGTTCAGTACTTGAGTTGTTCCCTGGCGGAGGTTTCCCATCAAATCTCAAGGATCTAAGAATCATTAATTGCTCTAGATTTGTTAGCTCACTGAAAGGAGCTTTCACAGACAATTCTTCTTTGAAAAGCTTGTGGATTGAAGATGTAGATGCAAAATGTTTTCCAGATGAAGGAAAGAAAGAGGCGAAGACTGGGAAAAGATTGCGCACATTAAAAGTTTGTATATATGAGAAGAGTTGGTCTTGCAGATGA 4122 0.4178 MKKKGGSVDDRSRYTRSSKEQGPNANKDSSAEAFKTGTSSKNSATEVSVRKEDDTSHTRGSTQAGPTWGRGPSKGAERSDALPASSLTKPGEGTLCTSPTGEAWPEEEEEEEEEEEEDEEEDEQAGGDSARADITNLENERGKQLRAVGLIRGVGAQAKITRGTLLFPAPIYSPGGPRNPKRHKNPNRWIRLIQRFASLRAQKNPSLMRVTSITQTPPNITSLIITPSARDPFFRLFGCTISRAWEATLHSIHSLADDAERKQFTDPHVRNWLLKVKDVVLDAEDLLDDIQNLSKRQDAESESQTSGCICKVLNFFKYSPISSLNKEIECKMEQILEDLEFLSSQRGHLGLKTATGVGYGLSNELPQQSQTTSLVVGTDIYGRDDDKELIFKWLTSDINDRNQPSILSIVGMGGMGKTTLAQHVFNDPRMNEDKFDVKAWVCVSDEFDVFKVSKAILEHVTSSTDDSRDTEMVHIRLKENLTGKRFLLILDDVWNETQPKWEEVRKPLLLRAKGSKILVTTRSKEVASTMWSEEYSLQQLQEDHCWKLFAKHAFRDDGTQPNQECREIGMKIVKKCKGLPLALKTMGSLLYNKSSFSEWQTVFRSEIWEFSKERCDIIPALALSYIHLPSHLKVCFAYCALFPKDYEFKKEDLIKLWMTENFAQCRSHSKTSEEVCQQYFNDLLSRSFFQQPDENKEEFVMHDLLYDLEKYVGGGLYFRCELDQTEKVQKVTRHFSVEVKYRQYFDGFGTLCNIERLRTFMAKDGSLSYFKMSIHELLSKFKFLRVLSLSDCSDLEELPDSVANLEHLRSFDLSGTAMKKLSEKICSLSHLQILMLNHCTYLVELPSNLHLLTNLCHLELRLTNVTKMPPYLGKLKNLKVVMSSFNVGHGFQQLGELNLEGSLSIEELQNVENSLDTLKADLKNKTDLVALTLNWGWNQNSIDSKKEEDVIENLHPSKNIKELSIYGYGGKRFPNWLLENSLWNMVSLLLNQCESCQRLPPLGLLPFLKVLSIIKLDGIVSIDGDFHGNNSSSFKSLETLEFSSLSRWEKWDCQAVTNAFPRLRHLSIRKCPKLKGQLPEQLIPLEMLQIKYCQQLETFAPRALDLQLSDCGKLQLEWGTMKSLTVETSLLEIVGSSDTLENLQIDSLYDDGVSLQSFPLDLFPKLRKLDLSGFDNLEMISQSLIHIHLEHLTLKYCHKLESLPGSMHMLLPSLRTLWIQGCSVLKSFPDGGFPSNLESLVIEDCSELESFPREGFPSILKRLLIKYCPRLKSFPHRGFPSNLHTLRIEGCSVLELFPGGGFPSNLKDLRIINCSRFVSSLKGAFTDNSSLKSLWIEDVDAKCFPDEGKKEAKTGKRLRTLKVCIYEKSWSCR* 1374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0049 1373 Gene3D - 539 623 IPR042197 -
Pvu10g0049 1373 MobiDBLite consensus disorder prediction 103 126 - -
Pvu10g0049 1373 MobiDBLite consensus disorder prediction 18 45 - -
Pvu10g0049 1373 Coils Coil 106 126 - -
Pvu10g0049 1373 Gene3D Ribonuclease Inhibitor 749 1127 IPR032675 -
Pvu10g0049 1373 SUPERFAMILY L domain-like 1146 1345 - -
Pvu10g0049 1373 Gene3D - 624 711 IPR036388 -
Pvu10g0049 1373 Gene3D - 364 536 IPR027417 -
Pvu10g0049 1373 Coils Coil 276 296 - -
Pvu10g0049 1373 PRINTS Disease resistance protein signature 406 421 - -
Pvu10g0049 1373 PRINTS Disease resistance protein signature 480 494 - -
Pvu10g0049 1373 PRINTS Disease resistance protein signature 576 590 - -
Pvu10g0049 1373 PRINTS Disease resistance protein signature 779 795 - -
Pvu10g0049 1373 Pfam NB-ARC domain 385 604 IPR002182 GO:0043531
Pvu10g0049 1373 Gene3D - 242 322 - -
Pvu10g0049 1373 SUPERFAMILY L domain-like 700 1099 - -
Pvu10g0049 1373 Coils Coil 905 928 - -
Pvu10g0049 1373 Gene3D Ribonuclease Inhibitor 1132 1344 IPR032675 -
Pvu10g0049 1373 Coils Coil 325 345 - -
Pvu10g0049 1373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 639 IPR027417 -
Pvu10g0049 1373 MobiDBLite consensus disorder prediction 1 17 - -
Pvu10g0049 1373 PANTHER OS05G0414200 PROTEIN 242 1206 - -
Pvu10g0049 1373 Pfam Rx N-terminal domain 244 304 IPR041118 -
Pvu10g0049 1373 MobiDBLite consensus disorder prediction 1 130 - -
Pvu10g0049 1373 PANTHER DISEASE RESISTANCE PROTEIN RP 242 1206 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0049 Pvu-Chr10 816221 821939 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0049 749 886 Miscellaneous Gene Families AT4G39270 36.170 1.34e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0049 - - pvu:PHAVU_010G004600g 2715.64