Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0047 ATGCTACAGCATTGTGGAATTCTCGGTGTTCTCTACTATGATGGATTACTACGCAGATTCGAAGGTGGTGGAGGATATCTACCAATAAGTGCTATTTTAACAAATCTACAAGATGGTCTATCGTCACTCCTGTTCATTTTTGCTTCTCTAATCTCAGAAGCATATACGGGTCCCGTCACTATGATCACTATTTGCGCTGCAACTTCCATCGAGGGTTTAATCCTAATATGGATATCAGCTTATTCAGAATCATCTGGTGCACTCTATGCAGCCATATTGCTCCTTACAATAGGGAAAAGTGGTCAAACGCTTTTAGATAGTTTTCTTCAAAATAAGGTAGAAGAGATACTTGAAGCAAGAGAAAAAATCGAAATAAAAGATGGAAGCACAGAAAAACAAAATGAGCTTGACCTCATACGTATAATTCTTACAAATACGTGGTTGTTAGTTCCACTGGTTGTTGGATACGTGGTTATACTATTTACTGACTTTTTCAATCAAGATTACGATATTATCTTCAGAAATTCAGCAGTTCTGATGGGAGGGTGTTATCTTTTGTTCCTCTTTGGTAGTACGAAGTATAGGCACGAACAAGTGTCTGATGAAAGCTATTTTGGCAAAATCTTTAGAATCTGCAAAGCAGCTTATGGGAGACGAAGATCAGATTATCCAGCCTCAGAGAATGGTTATTACTGGAAAGGTAATGTGCGGACCAATTTATGTTATGTCTATGGTAAAGGAGTGAGATTAAAGCCACGAGTTCCACGGCTCTTCAGGTGGTTGGACAAAGCAGCTATCCTTGTTCCTGAAGTGAGTCCCGACACGCAAGAAAGGGATGGGAAGGTTTGCTCGGTAAAGGAGGTGAGGGAAGTGAAGAGCCTTGTTCCTATGAACTACCTGTGCTTTTCCTTCTTTGCTTACAGTTTACTCGTGGCTACTGGGAACACTTTTTTTGTTGCACAAGCAAGCAGCATGACAACTACCAATGGCTATGATATCTCTAAACTCTTTTTGATCAAAGTTGCCGCCGGAAAAGTGTCGCGATTCATCTGCTTTTTGATCATGGCCGGATTGCGTAGTAAGAGAACCACATATTCTACGTCGAAAACATTTGTAGTGACGACTTCGATTATAAGGATTGGTTTTGGAATGGTGTCTGCCGTAATTTGCTGCTTCGTAGCATGGAAAATGGAGTTTTATAGATTGTATTCCCTAGAAGTGAAAATCGAAGCCTTATATCCGCAGTTTATATTGTTGGGAATGACGGAGGCACTTGTTGAAGGGGGGTTAACGAAATTATTTCATGCTCACGTCGCAAAATCAATGTGGAGTTTTGCGGATTCGTATATTGAATTGGTGAATGGTATTGGCAAACTCCTCCTTATTCCATTCGTCTTAGCTTTGAGGGGCAGTTGGTTGAAGGAGAGTATCTACACTACCGACTTAAACAGGTTCTATCTGATGTTGGGAATATTGAACGCTGCCCTCCTCCTAGTTTATGGCTACTACTCCTTCAGATACACATACAAGGAGACATGTCCAGAAGATGCTGCTCAACCAGATCTGGAAGATAAATGA 1578 0.4081 MLQHCGILGVLYYDGLLRRFEGGGGYLPISAILTNLQDGLSSLLFIFASLISEAYTGPVTMITICAATSIEGLILIWISAYSESSGALYAAILLLTIGKSGQTLLDSFLQNKVEEILEAREKIEIKDGSTEKQNELDLIRIILTNTWLLVPLVVGYVVILFTDFFNQDYDIIFRNSAVLMGGCYLLFLFGSTKYRHEQVSDESYFGKIFRICKAAYGRRRSDYPASENGYYWKGNVRTNLCYVYGKGVRLKPRVPRLFRWLDKAAILVPEVSPDTQERDGKVCSVKEVREVKSLVPMNYLCFSFFAYSLLVATGNTFFVAQASSMTTTNGYDISKLFLIKVAAGKVSRFICFLIMAGLRSKRTTYSTSKTFVVTTSIIRIGFGMVSAVICCFVAWKMEFYRLYSLEVKIEALYPQFILLGMTEALVEGGLTKLFHAHVAKSMWSFADSYIELVNGIGKLLLIPFVLALRGSWLKESIYTTDLNRFYLMLGILNAALLLVYGYYSFRYTYKETCPEDAAQPDLEDK* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0047 525 Gene3D MFS general substrate transporter like domains 28 515 IPR036259 -
Pvu10g0047 525 Pfam POT family 173 460 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu10g0047 525 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 46 500 - -
Pvu10g0047 525 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 46 500 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0047 Pvu-Chr10 775168 784107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0047 185 516 Organic Solute Cotransporters AT3G54450 26.197 1.24e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0047 - K14638 pvu:PHAVU_010G004400g 1028.47