Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0046 ATGATACTATGGAGATCTGCATCATCAGCTTCAGGAGAACGTTTGATCTATGCAGGCATAGTCTTCCTTGCATTAGGGAAGAGTGGACAAAAGCTTGCAGAAAATTTTCTTCATTATCAGTTGCAACAGAAAATCAATTCAAAAGATCAGGATACAATTCCTCCCAATATCTGGTTGACTGCTCCATCGATAGTGGGATACATCATGCAAGTCTTCAGATTCGCTGCACTACTCATGGGAGGGGCGTTTCTATTGTTCCTTTTTGGTTGTGTGTGGTACAGGCGCGAAGAACTAGCCGGAGAGAGCAATGTACGGAAGATTCAAAGAATCTGCAAAGCAGGTTTACGCAAACGAAAATCAAACTACCCGACCACAGGGGATTCTTATTACTGGAAGGGTTACAAGCAGGCCCATTTGTACGAGCACGGTGAGGGACTAAGGTTACTGCCACGAGTTCCACGTCAGTTCAGGTGGTTGGACAAACCAGCTATACTCAAAGCAGAAGAAGATCATGAAGATGTGAGTGATGCTGAGACGCAGGAAAAGAAAGGAAACCTTTGCACGGTGAAGGACGTGAGGGAAGTGAAGAGCCTTGTTCCTATGATTTACCTTTTCGTTGCCTTCTTTGCTCATAGCTTACTTATGGCTTCTCGGAACACTTTCTTTATTGCACAAGCGGGTTCAATCGAGGATACTGAAAATAGAAACTATGTCTGGATTCTCATTTTGATCACGGATGGCATGAACAAAATCTCACGGTTCGTCTGCTTTGTTATCGCTTCTGCATTTGGATGGTTTAAAGGTATGGAAAACGGTGGTGGTAGGTTGAAGAGAAAATCCGGAACAATTATAAGGATTGGTTTTGGCATGTCTTGTGCAGTAGTTTGCGGTGTCGTAGCATGGTACTTCGAACATCGTAGGCGGGATTCGAAAAAAGGTGTCACGACAGTTACGTTAATTCCGCAGTTTTTGTTGCTGGGAATGTCGGAGGGGCTTGTTAATGGTGGATTAGAGAATTTGTTCAAAGGCCACGTGGCGAAGTCGATGTGGCGTTTTGAGGATTCTTTTATAGAAGTGGTGTTTGGCGTTGGTGAACTTCTGATTATACCATTTATCTTCACTAGCTGGATCCAGAATAGTGTGGAAGAAAGCCATTTAGAAAATCTGTATCTCATGTTGGCAATATTGAACGCTGTTTTCCTTCTTGGTTTTGCATACTACTCCATCAGATATACATACGGGGAAGAGTGTCCAGAGGATGAAAAAGTTACGGTGGAAGAAACATCGGAAACTGCATAA 1299 0.4326 MILWRSASSASGERLIYAGIVFLALGKSGQKLAENFLHYQLQQKINSKDQDTIPPNIWLTAPSIVGYIMQVFRFAALLMGGAFLLFLFGCVWYRREELAGESNVRKIQRICKAGLRKRKSNYPTTGDSYYWKGYKQAHLYEHGEGLRLLPRVPRQFRWLDKPAILKAEEDHEDVSDAETQEKKGNLCTVKDVREVKSLVPMIYLFVAFFAHSLLMASRNTFFIAQAGSIEDTENRNYVWILILITDGMNKISRFVCFVIASAFGWFKGMENGGGRLKRKSGTIIRIGFGMSCAVVCGVVAWYFEHRRRDSKKGVTTVTLIPQFLLLGMSEGLVNGGLENLFKGHVAKSMWRFEDSFIEVVFGVGELLIIPFIFTSWIQNSVEESHLENLYLMLAILNAVFLLGFAYYSIRYTYGEECPEDEKVTVEETSETA* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0046 432 SUPERFAMILY MFS general substrate transporter 146 414 IPR036259 -
Pvu10g0046 432 Pfam POT family 72 352 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu10g0046 432 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 4 407 - -
Pvu10g0046 432 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 4 407 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu10g0046 432 Gene3D MFS general substrate transporter like domains 2 419 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0046 Pvu-Chr10 756940 759174 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0046 82 426 Organic Solute Cotransporters AT3G54450 24.528 1.44e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0046 - K14638 pvu:PHAVU_010G004300g 867.84