Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0040 ATGGCGCTGCAAGAAAACGGTTCAGAAAAAAAATTCTCATTTGCTCTAGTGAAGAACTTTTTGCATCAACTCCGTCATCTATTCGTCAACTCTAAGGCCCTATTCTTCATGGGCGCTTTGGCTGCAAGCTACATCATTGTGGAATTCTCGGTGTTCTCTACTATGATGGATTACTACGAAGAATCAGTGATGGTAGAGGATCTAGGAAGAAGTGCTATTTTAAGAAATCTACAAGATGGTCTATCGTCACTCCTGTTCATTTTTGTTTCTCTAATCTCAGAAGCATATACGGGTCCCGTCACTATGATCAGTATTTGCGCTGCAGCTTCGATCGAGGGTTTAATGCTAATATGGATATCAGCTTATTCAGAATCATCTGGTGCACTCTATGCAGCCATATTGTTCCTTACAATAGGGAAAAGTGGTCAAACGCTTTTAGACAGTTTTCTTGAAAATAAGGTGGAAGAGATATTTGAAGCAAGAGAAAAAATCGAAATAAAAGATGGAAGCACAGAAAAACAAAATGAGCTTGACCTCATACGTATAATTCTTACAAATACGTGGTTGTTAGCTCCATTGGCTGTTGGATACGTGGTAATAGTATTTACTGACTTTTTCAATCAAGATTACGATATTATCTTCAGAAATTCAGCAGTTCTGATGGGAGGGTGTTATCTTTTGTTCCTCTTTGGTAGTACGAAGTATAGACACGAACAAGTATGTGATGAAAGCAATCTAGGAAAGATCTTGAGAATCTGCAAAGCAGCTTGTGGCAGACGAGAATCAGATTATCCAGCCTCAGAGAATGGTTATTACTGGAAGGGTAATGTGCGGACCAATTTATGTTATGTCTACGGTAAAGGAGTGAGATTAAAGCCACGAGTTCCACGGCTCTTCAGGTGGTTGGACAAAGCAGCTATACTTGTTCCTGATGTGAGTCTGGACACACAAGAAAGGGATGGGAAGGTTTGCTCGGTAAAGGAGGTGAGGGAAGTGAAGAACCTTGTTCCTATGAACTACCTGTGCTTTTCCTTCTTTGCTTACAGTTTACTCGTGGCTACTGGCAACACTTTTTTTGTTGCACAAGCAAGCAGCATGACAACTACCAATGGCTATGATATCTCTAAACTCTTTTTGATCGAGGTTGCCGCGGAAAAAGTGTCGCGATTCATCTGCTTTTTGATCATGGTCGGCTTGCGTAGTATGAGAACCACACATTCTACGTCGAAAACATTTGTAGTGACGACTTCGATTATAAGGATTGGTTTTGGAATGGTGTGTGCCGTAATTTGCTGCTTCGTAGCACGGAAGGTGGAGCTTCATAGATTGTCTTGGATATTAAATCAGACCAAAGAACTGAAAATCGCAGCCCTATATCCGCAGTTTATATTGTTGGGAATGACGGAGGCACTTGTTGAAGGGGGATTAAAGAAATTATTTCATGCCCACGTAGCAAAATCAATGTGGAGTTTTGTGGATTCGTATATTGAATTGGTGAATGGTATTGGCAAACTCCTCCTTATTCCACTCGTCTTAATGTTCCGTGGCAGTTGGTTCAAGAAGACTATCGACACTAGCCATTTAGACAGGTTCTATCTGATGTTGGGAATATTGAATGCTGCGCTCCTTCTAGTTTGTGGCTACTACTCCTTCAGATACACATACAAGGAGACATCTCCAGAAGATGCTGCTCAACCCGATCAGGAAGATGAAGAAAACCCTGAAGGCCATGTTGAAGAAGAAGAGAACCAGGTTGAAGCAAATGTTGAAGAACAAGAAGATCATCTAGGCCATTTTGAAGAAGAAGACCAGGTTGAAGAAAATGTTTAA 1830 0.4098 MALQENGSEKKFSFALVKNFLHQLRHLFVNSKALFFMGALAASYIIVEFSVFSTMMDYYEESVMVEDLGRSAILRNLQDGLSSLLFIFVSLISEAYTGPVTMISICAAASIEGLMLIWISAYSESSGALYAAILFLTIGKSGQTLLDSFLENKVEEIFEAREKIEIKDGSTEKQNELDLIRIILTNTWLLAPLAVGYVVIVFTDFFNQDYDIIFRNSAVLMGGCYLLFLFGSTKYRHEQVCDESNLGKILRICKAACGRRESDYPASENGYYWKGNVRTNLCYVYGKGVRLKPRVPRLFRWLDKAAILVPDVSLDTQERDGKVCSVKEVREVKNLVPMNYLCFSFFAYSLLVATGNTFFVAQASSMTTTNGYDISKLFLIEVAAEKVSRFICFLIMVGLRSMRTTHSTSKTFVVTTSIIRIGFGMVCAVICCFVARKVELHRLSWILNQTKELKIAALYPQFILLGMTEALVEGGLKKLFHAHVAKSMWSFVDSYIELVNGIGKLLLIPLVLMFRGSWFKKTIDTSHLDRFYLMLGILNAALLLVCGYYSFRYTYKETSPEDAAQPDQEDEENPEGHVEEEENQVEANVEEQEDHLGHFEEEDQVEENV* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0040 609 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 79 549 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu10g0040 609 Coils Coil 582 602 - -
Pvu10g0040 609 MobiDBLite consensus disorder prediction 564 588 - -
Pvu10g0040 609 Pfam POT family 208 506 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu10g0040 609 MobiDBLite consensus disorder prediction 559 609 - -
Pvu10g0040 609 Gene3D MFS general substrate transporter like domains 22 562 IPR036259 -
Pvu10g0040 609 PANTHER PROTEIN NRT1/ PTR FAMILY 5.6-LIKE 79 549 - -
Pvu10g0040 609 MobiDBLite consensus disorder prediction 589 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0040 Pvu-Chr10 709704 715639 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0040 41 571 Organic Solute Cotransporters AT3G53960 24.306 6.49e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0040 - K14638 pvu:PHAVU_010G003800g 1153.66