Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0034 ATGGCGTCACTGCTGCTAGCATCCCCTCCTCCACTCTCCACTCAATTTCAGACTTCCATGTCTCACCTTTCCTTCTCTCACTCCCAAACTCTCTTCTCGTCACTCTCCACTCCTTTCCCTTCCCTCTCAGCGTCTGCAACCTCCAATCTCTCCCTAACTCCTTCTGTGTACTGCGGAAGAGGGGACAGGAAAACGGCAAAGGGGAAGCGCTTCGCCCATTCGTTTGGGAATGCGAGGCCAAAGGACAAGAAGAAGGGTAGAGGGCCACCAAGGATTTATGCTCCACCGGCACCTTCCAAGAAAAACAGATTCGAAGATAATGAGGTGGTGAAGATTGAAATTGACGAGTCTCTCTTTTCTGGCTGA 366 0.5109 MASLLLASPPPLSTQFQTSMSHLSFSHSQTLFSSLSTPFPSLSASATSNLSLTPSVYCGRGDRKTAKGKRFAHSFGNARPKDKKKGRGPPRIYAPPAPSKKNRFEDNEVVKIEIDESLFSG* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0034 121 TIGRFAM ribo_THX: ribosomal small subunit protein bTHX 59 83 IPR030826 GO:0005840
Pvu10g0034 121 PANTHER 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC 1 120 IPR044695 -
Pvu10g0034 121 MobiDBLite consensus disorder prediction 62 89 - -
Pvu10g0034 121 MobiDBLite consensus disorder prediction 61 104 - -
Pvu10g0034 121 Pfam Ribosomal protein S31e 1 101 IPR030826 GO:0005840
Pvu10g0034 121 PANTHER 30S RIBOSOMAL PROTEIN S31, CHLOROPLASTIC 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0034 Pvu-Chr10 637033 638180 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0034 K19033 - gmx:100805197 180.644