Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0032 ATGGAAACCAAACCAGGGTGGAGGGCCATTTCTTACATCTTAGGGACTCAAATAGTTGAGAAAATTGCAACAGTAGGAATGATGGCAAATTTCATGGTGTATTTGATGCAATTCTTCAACTTGGGTCAGGTTGCTGCTGCAAATGTTCTTGGTGCATGGGCAGGAGCTAGCAATTTAATACCAATTATTGGGGGCTGTGTTGCTGATGCCTATCTTGGAAAATTCAAAACCATTGCTATTTCATCATTTGGAACACTTCTGGGAATGGTGATGCTAACACTAACAGCTTGGGTGCCAAAACTTCATCCTCCAAGTTGCAGTTCAACTCATGAGCACTGTGTTCCTCCAACAAGTTCCCAACTTGGGTTCTTGTTTTTAGGCCTTGGGTGGCTGGCTCTGGGCACAGGGGGGATTGGACCATGCACTATTCCCTTTGCCATGGATCAGTTTGACACAACTTGCTCTGAAGGAAGGAAAGGAGTGAACAGCTTCTTCAATTGGTACTACACTTCACTGACAGTGGTGCAGTTGATCGGTCTCACAGCAATAGTTTACCTCCTCAACAAAAGCTGGATCTTGGGTTATGGACTACTGAGTCTTCTCATGTCATTTTCAATTATCATATTTTTTGTTGGAGCTAGTGTTTATGTCTACATTCCAGCAGAAGGAAGCTTGTTTTCTGGTATTGCACAGGTGTTTGTTGCAGCTTATAAGAAGCATCACCTCAAAATTCCACTAAAAGAAGAGGATGGTCTTTACTATGATCCCCCAGCGGATGAAAAAACACCACTCAAGATGCCCTTGACCAATCAACTTAGGTGTTTAAACAAAGCAGCCCTAATACGAGACGATGAACTTAACGAAGGAGGTAGTGTGAAAAATCCATGGAGGCTTTGCAGCATTCAGCAAGTGGAAGAAGTGAAGTGTTTGATAAAAATGCTTCCAATCTGGGCTTCTGGTATTCTTTGCTTTATTCCCATAGTGCAACAAGGCACCTTTCCAGTATCGCAGGCCTTGAAAATGGACCGTCACATTGGAGCACACTTCAAACTTCCACCTGCATCCTACAGCGCGGTGTCCCTAATCACCATTTGCATCTTCCTCCCATGCTTCGAGCTCTTTCTGCAGCCAGCATTGGCAAAAGTAACCAAAAAAGAGGAGGGTCTCACGAGCCTTCAGAAGATAGTGATCGGTGATATATTCTCAGTTCTCACAATGGTGAGTGCTGGGTTGGTGGAGGGGCGAAGAAAGGGTGTGGCAAACTCACATGGTGCAGGTGATGGGGTGGCCCCCATGAATGCAATGTGGCTGGTACCACAGTTTGTGTTGTTGGGATTGTGCGAGATGTTTACCCTTGTTGGACACATTCAGTTCTACAGCACCCAGTCACCAGAGAAAATGAAAAGCATTGGAAATTCGTTGCAGTATCTTGTGCTGGCATTTTCAATTTACGTTGGCACGTTGGTGGTGAACGTGGTGCACCAAGTGACTCGAAAGCATGGTGGAATTGATTGGCTCAACGATGACATCAACGCTGGGAGATTGGACTACTATTACTTCCTCATAGCAGGATTTGCTGCAATGAATCTTCTCTACATCTTCTTCTGTGTTAAACGCTACCATTACAAGGTGGTCATTGTCACACCAGAAGTTGAGGACAAACCTTCATTGAACCCTTCAGCTGTGTTGTAA 1692 0.4468 METKPGWRAISYILGTQIVEKIATVGMMANFMVYLMQFFNLGQVAAANVLGAWAGASNLIPIIGGCVADAYLGKFKTIAISSFGTLLGMVMLTLTAWVPKLHPPSCSSTHEHCVPPTSSQLGFLFLGLGWLALGTGGIGPCTIPFAMDQFDTTCSEGRKGVNSFFNWYYTSLTVVQLIGLTAIVYLLNKSWILGYGLLSLLMSFSIIIFFVGASVYVYIPAEGSLFSGIAQVFVAAYKKHHLKIPLKEEDGLYYDPPADEKTPLKMPLTNQLRCLNKAALIRDDELNEGGSVKNPWRLCSIQQVEEVKCLIKMLPIWASGILCFIPIVQQGTFPVSQALKMDRHIGAHFKLPPASYSAVSLITICIFLPCFELFLQPALAKVTKKEEGLTSLQKIVIGDIFSVLTMVSAGLVEGRRKGVANSHGAGDGVAPMNAMWLVPQFVLLGLCEMFTLVGHIQFYSTQSPEKMKSIGNSLQYLVLAFSIYVGTLVVNVVHQVTRKHGGIDWLNDDINAGRLDYYYFLIAGFAAMNLLYIFFCVKRYHYKVVIVTPEVEDKPSLNPSAVL* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0032 563 CDD MFS_NPF1_2 10 540 - -
Pvu10g0032 563 SUPERFAMILY MFS general substrate transporter 5 541 IPR036259 -
Pvu10g0032 563 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 6 551 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu10g0032 563 Gene3D MFS general substrate transporter like domains 1 546 IPR036259 -
Pvu10g0032 563 Pfam POT family 75 505 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pvu10g0032 563 PANTHER PEPTIDE/NITRATE TRANSPORTER 6 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0032 Pvu-Chr10 628046 631123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0032 1 556 Organic Solute Cotransporters AT1G69870 47.594 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0032 - - vra:106773369 932.169