Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0030 ATGTCATCATCTTTTGGGAGCTCCGGCCAGACGCTCGATGAGGACGGCGCGTTCACCGGCAACTCGTTCTCCAATTTCGACGGCAGCTCGTCTCCGATTTTTGGTGGCGCGTCACCCAACGATGGAGATGACTTCTCTGCTCAGACGGCGCCGGATACTATGTCTCCGACGCCGATCTACTCTGCTGCCGGGGGATTCGTCACGTTCTCGCCGGAGCTTGACAGAGATGGTGTTGACGGAGGTTTCGGAAATTCCGATGGCCCGATCTTGCCGCCTCCGACAGATATGGCGGTGGAGGAAGGGTTTGCTTTGAGAGAGTGGCGAAGGAAGAACGCGATTCAATTGGAGGAGAAGGAGAAGAAAGAGAAAGAGATGCGGTCGCAGATAATAGAAGAAGCGGGAGAGTACAAAGTTGAGTTCTACAGAAAGCGTGAGGTTAATGTTGAGAACAATAAGGCTTCTAACAGGGAAAGAGAAAAGCTATTTTTGGCGGGTCGGGAGAACTTCCATGGTGAAGCTGACAAAAACTATTGGAAGGCAATTGGTGAACTAATTCCACATGAAGTGCCTGCAATAGAGAAGAGAGGGAAAAAGGACAAAGAGAAGAAGCCTTCCATTGTTGTGATCCAGGGTCCAAAACCAGGGAAGCCAACTGATCTTTCAAGAATGCGCCAAATATTGTTGAAGCTCAAGCATAATCTGCCTCCACATATGAAGCCCAAACCTCCACCATCTTCAGAAACCAAAAGGGACCCGAAAACTGGACCTGCTGATGGAGCTAGTACAGGTTCTAATCCACCCAAGGTTGTGCCTGTTGCAACTCCTGAGGCTGTTGCTGCAGCTTGA 846 0.5024 MSSSFGSSGQTLDEDGAFTGNSFSNFDGSSSPIFGGASPNDGDDFSAQTAPDTMSPTPIYSAAGGFVTFSPELDRDGVDGGFGNSDGPILPPPTDMAVEEGFALREWRRKNAIQLEEKEKKEKEMRSQIIEEAGEYKVEFYRKREVNVENNKASNREREKLFLAGRENFHGEADKNYWKAIGELIPHEVPAIEKRGKKDKEKKPSIVVIQGPKPGKPTDLSRMRQILLKLKHNLPPHMKPKPPPSSETKRDPKTGPADGASTGSNPPKVVPVATPEAVAAA* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0030 281 MobiDBLite consensus disorder prediction 1 56 - -
Pvu10g0030 281 MobiDBLite consensus disorder prediction 1 95 - -
Pvu10g0030 281 MobiDBLite consensus disorder prediction 189 206 - -
Pvu10g0030 281 Coils Coil 104 135 - -
Pvu10g0030 281 MobiDBLite consensus disorder prediction 189 281 - -
Pvu10g0030 281 PANTHER CLATHRIN LIGHT CHAIN 11 278 IPR000996 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Pvu10g0030 281 PANTHER CLATHRIN LIGHT CHAIN 3 11 278 - -
Pvu10g0030 281 Pfam Clathrin light chain 99 232 IPR000996 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0030 Pvu-Chr10 613612 615748 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0030 - - aprc:113850159 381.333