Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0012 ATGGTAGGACCAGTGAGGCCTCAATTTGTGTTGTTTGGTTCATCCATAGTTGAGCTCAGTTATAGTTGTGAAGGTTGGGGAGCCACTCTTGCCAACTTGTATGCTCGCAAGGCAGATGTAATGTTGAGAGGATATTGTGGTTGGAATTCGAGGCGTGCTCTGCAGGCTCTGGATAAAATATTTCCCAAGAATGCCAGTGATCAACCATCGTTGGTAATTGTGTACTTTGGTGGTAATGATTCTATGCATCCACACCCAACTGCCCATAGTCCTCATGTACCCCTCCAAGAATACATTGAAAATATGAGGAAGATTGCAATTCATCTAAAGAGCCTTTCAAAGAAGACTCGCTTAATATTTCTCAGTTCCCCTCCCATCAATGAGGTGCAAATGCATGAAATGCTCAGTGATCTGCTGGGTCCATTAAAAAGGACAAACGAATCTTGTCGAATATACTCAGAAGCATGTTTGGAGCTGTGCCGTGAGATGAATGTGAAAGCCATTGATCTCTGGTCTGCAGTCCAGCAAAGGCATGACTGGTCAGATGTTTGCTTCACGGATGGAATTCATTTGTCACATGAGGGAAACAAAATAGTGGCAAAAGAGATACTGAAGGTCCTCAGAGAAGCAGATTGGGAACCTAGTCTGCATTGGAACTCAATGCCAACAGAGTTTGCAGAAGATTCACTTTATGATCCAAATGGTGTGGATGAGGAGAGTATTATAAATGTCTCTAACGGGAATTTCCAGGGAAACTCTCAATCAAAGTAG 771 0.4306 MVGPVRPQFVLFGSSIVELSYSCEGWGATLANLYARKADVMLRGYCGWNSRRALQALDKIFPKNASDQPSLVIVYFGGNDSMHPHPTAHSPHVPLQEYIENMRKIAIHLKSLSKKTRLIFLSSPPINEVQMHEMLSDLLGPLKRTNESCRIYSEACLELCREMNVKAIDLWSAVQQRHDWSDVCFTDGIHLSHEGNKIVAKEILKVLREADWEPSLHWNSMPTEFAEDSLYDPNGVDEESIINVSNGNFQGNSQSK* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0012 256 Gene3D SGNH hydrolase 6 235 IPR036514 -
Pvu10g0012 256 Pfam GDSL-like Lipase/Acylhydrolase family 11 198 IPR013830 -
Pvu10g0012 256 SUPERFAMILY SGNH hydrolase 6 207 - -
Pvu10g0012 256 CDD Isoamyl_acetate_hydrolase_like 8 207 - -
Pvu10g0012 256 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 250 - -
Pvu10g0012 256 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 1 250 IPR045136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0012 Pvu-Chr10 442388 445366 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0012 K23978 - gmx:100796512 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g1064 8 11699393 11701785 Pvu10g0012 10 442388 445366 PCT