Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0008 ATGGTCGGAAAAACCATGTCCATGGCGGTCACTTCGCGCGAAAAGCTTGCGAGTCTCGTCAACGCTGCCAAGTTGGCCAGTGACATCCCCTCCAAGCTCGAATCCCTGCGCCAACTGCGCCACGAACTTCCCCCCGAAGACCCCGTCCTCCTCACCGAGTTCCTACCCTCACTCTTCCTCTTCCACTCGGATCGCTTCGGTCCCGTGCGCAAATTTATCACCGAGATGTTTGGTGAGATTGGATTGAAGAACACGGAGTTCTTGTCTGACATTGTGCCTATGCTAATTGATGTACTGGATGACGACACACCGGCAGTGGTTCGGCAAGCTCTTCAGTGTGGAATTCAGTTGTTTCGTGGCACACTTGAGAAAATTGTGGTTCAGGGTCTATACTCTAGTGATTTAGATGGTGCACTTGAATCTGGATGGGAATGGATGCTTAAATTCAAAGACAAAGTATACTCAATAGCTTTTCAACATGAAAGTGGTGGTGCAAAGCTGCTGGCACTGAAGTTTGTTGAGGCAGTTATTCGTCTTTACACTCCTGATCCTAGTGGTTCCTCAGAGCCCACTTCTCGTCAAGGAAAGCCTGTGGAATTTAATATATCATGGCTCAGGCGGGGTCATCCAGTACTCAATATTGGAGATTTGAAAATTGAAGCAAGCCAAAGTTTGGGTCTCTTGCTTGATCAACTCAGATTTTCATATGTGAAGTCCCTTAGTAACTCAGTTATCATTGTGCTGATTAAAAGTCTTTCAGCAATTGCAAATGAAAGGCCTGCATTCTATGGCCGCATCTTGCCCGTTTTACTCAGTTTGGAACCTTCTAGCTCTGTCATTAATGGGTTTTGTGTATCAGCTGCACATCTTGCTTTGAAGAATGCCTTTCTTACTTGCTCGAAATGTACACATCCAAGTGCTGCTCCGTGGAGAGATCGTTTGGCAGGGGCCTTAAAGGAAATACAGTCAGAAGGAAAGGCAGATCGGGTGTTCCACCTAATCTCAGCTAGTAATGGAAGCATGGAGAGAGAGAAGGATGATCAACCTGTTATCAAGGAAGAGGAACCTGCAATAAATTCTGATGATTCAGTACACAGTGATTTGTCAAGAAAACGATCTGGATCACAAATTGAAGGTGATTTAGCTGAAGATGTTCATGGAAAACGTGTCAGGACAACAATTGATGCTATGGAAGAACCTAAGAAAGAGTTGGATGAACATACCACTTCCAACTCTCAGGATGAGACTCCTTCAAATGTACCAACATCTTCAACAGGAGATGTGGATAATGGGCCTGTACGGCAACTTGTTACCACATTTGGTGCTTTGATTGCTCAAGGTGAAAAAGCTGTTGGGCATCTTGAGATTCTCATCTCAAGTATTTCTGCTGACTTGCTAGCTGAGGTGGTGATGGCAAATATGCATAACTTACCTCCGAGTTACCCTAATACTGAAGGAAATGAACAACTGCAAGACATTAGTATGATTGGTTCTGATGACAAGGCTAAATATCCACCATCATTTGTAGCTGCTGTTATGTCACTTTCTAGTACTTTCCCACCAATAGCTTCCCTTCTTGATGCACAACAATCAGTTTCAAATGAGGCTGAGAAGTCACAAGGGGAGGAAGAAATTTCTGCAACTGCTGTAAATAGTGGTGCTGTTCATTCTGGCATGAATCTTGTATCTGAAAATGTACCATCTCCTACTGATTTTCCAACTTCTGATGCTAGTATACCTGGAGTAGAGAATGGCTGTACAACTATGCCTCCTGACATCCATGATGTTGGAAACTCAGAGAGTGGAATTCCTGGCCTGGATTCTTTTGGTCGTAGTGATGCCTTGTCAGAAACTTTTGCTCCTTCTTTATTGGCTTCCACTGAAGTGGACCTAGAAGATGGCAGCCAAGACCAAGATACAAGTTTGGATCTGCGGTCACCCCTGAACTTAGCTCCATCAATATCAACAGATAGATCTGAGGAGCTGAGTCCAAAAGCGGCTGTTAGAGATGTCAATAGCTTGGTATCATCAACAGCTACTTCAGTTGTGTTGCCTTCGCGTTTAGTCTTGCCAAAGATGATTGCTCCAGTTGTTGAACTTGAAGATGAACAAAAGGATCATTTGCAAAAGTCATGTTTTATGCGTATTATTGATGCATATAAGCAAATAGCGGCAGCTGGAGGCTCCAAAGTCCGTTTTTCGATACTTGCTTATTTAGGAGTTGAGTTTCCCTTAGAATTAGACCCATGGAAACTATTACAGCAGCATATTTTGATTGATTACACCAGTCATGAGGGACACGAGTTGACATTGCGTGTCCTCTACAGATTATTTGGTGAGGCTGAAGAGGAGCCTGACTTCTTTTCTTCCACTACTGCAGCTTCTGTATATGAAAAATTCCTCCTTACAGTGGCAGAAGCACTTAGAGATTCATTTCCACCTTCAGATAAATCATTAAGTAAATTGCTTGGTGAATCTCCTTATTTACCAAAATCAGTTCTGAAAATTTTAGAAAACATGTGTTCTCCGGGAAATGGGGATAGAGGTGAAAAGGAGTTGCACTCACTGAATGCGGATAGAGTAACTCAAGGTCTAAGTGCTGTATGGAGTTTGATTCTTCTTAGGCCTCCGATCCGAGATACTTGCTTACAAATTGCTCTACAGAGTGCAGTGCATCACTTGGAAGAAGTGCGTATGAAGGCGATACGTCTGGTGGCAAATAAGCTTTATCCTTTGTCATCCATTTCTCAGCAAATAGAAGATTTTGCAAAGGAAATGCTTTTCTCAGTGACAAGTGATGATGTGTTTGAATTAACAGATGCTGAAGGGTCCATTGCTGATTCACAAAAGGGACCTGATGTTGAAAAGGTTTCAAACGAACAATCATCATTGAGTGGCAGCACTAAAGATGTCTCAGATAATCGTCAATCATGCACATCTGAGAGTGTCTCACCAGATTCAGTTTCTGAGGCTCAGAGGTGCATGTCATTGTTTTTTGCTTTGTGTACAAAGAAACATTCTCTCTTTCGCCAAGTATTTGTCATCTATAGAAGCACATCAAAGGCAGTAAAGCAGGCAGTACATCGACAAATTCCTATTCTAGTACGAACTATGGGCTCATCTTTGGATCTTCTTGAAACTATTTCGGATCCTCCAAATGGAAGCGAGAATCTTCTAATGCAGGTGTTGCATACACTTACAGATGGTACGACCCCTTCTAAGGATTTAATAAGCACTGTGAAAAAGTTGCATGATTCAAAACTCAAGGATGCAGAGGTTCTTATTCCAGTATTACCATTCCTATCGAATGACGAGGTAATACCGATTTTTCCTCACATTGTGAATCTTCCTTTGGAGAAATTCCAAACAGCACTTGGTCGTATATTACAGGGATCATCACAATCTGGTCCGGTGCTTTCTCCGGCTGAAGTTTTAATTGCAATTCATGGAATTGATCCTGAAAGGGATGGAATTCCCTTGAAAAAGGTGACAGATGCATGCAATGCTTGTTTTGAGCAGCGACAAACTTTTACGCAGGAAGTTATTGCCAGAGTTTTGAATCAGTTGGTTGAGCAAATTCCTCCTCCTTTATTATTCATGCGTACAGTGTTACAAGCAATTGGTGCTTTTCCAACGCTGGTGGACTTCATCATGGGGATTCTTTCTCGCCTTGTGACAAAGCAGATATGGAAATACCCGAAGTTGTGGGTGGGATTCTTGAAGTGTGTGCAGCTGACAAAACCACAGTCATTTGGCATTTTGCTTCAGCTGCCTCCAGCACAATTAGAGAATGCCTTAAATAGAATTTCTGCCTTGAAGGCACCATTGATTGCTCATGCTAGCCAGCCAGATATACAATCTAAACTTCCGAGGGCTATGCTGGTTGTTCTTGGAATTGCATCCGATTCTCAGGTTTCAAGTCAAGCACAAACTACTCAGACACAGACTAGTCAAACACAGACTACTCAAACACGGACTAGTCAAACACAGACTATTCAGACACAAACTAGTCAAACACAGACTACTCAGACACAAACTAGTCAAACACAGACTGGTGAGACATGCAACTCAGACAAGGACACAGTGACAGAAAAGTCTAAAGAATCATCTACCGCTAGCTAA 4122 0.427 MVGKTMSMAVTSREKLASLVNAAKLASDIPSKLESLRQLRHELPPEDPVLLTEFLPSLFLFHSDRFGPVRKFITEMFGEIGLKNTEFLSDIVPMLIDVLDDDTPAVVRQALQCGIQLFRGTLEKIVVQGLYSSDLDGALESGWEWMLKFKDKVYSIAFQHESGGAKLLALKFVEAVIRLYTPDPSGSSEPTSRQGKPVEFNISWLRRGHPVLNIGDLKIEASQSLGLLLDQLRFSYVKSLSNSVIIVLIKSLSAIANERPAFYGRILPVLLSLEPSSSVINGFCVSAAHLALKNAFLTCSKCTHPSAAPWRDRLAGALKEIQSEGKADRVFHLISASNGSMEREKDDQPVIKEEEPAINSDDSVHSDLSRKRSGSQIEGDLAEDVHGKRVRTTIDAMEEPKKELDEHTTSNSQDETPSNVPTSSTGDVDNGPVRQLVTTFGALIAQGEKAVGHLEILISSISADLLAEVVMANMHNLPPSYPNTEGNEQLQDISMIGSDDKAKYPPSFVAAVMSLSSTFPPIASLLDAQQSVSNEAEKSQGEEEISATAVNSGAVHSGMNLVSENVPSPTDFPTSDASIPGVENGCTTMPPDIHDVGNSESGIPGLDSFGRSDALSETFAPSLLASTEVDLEDGSQDQDTSLDLRSPLNLAPSISTDRSEELSPKAAVRDVNSLVSSTATSVVLPSRLVLPKMIAPVVELEDEQKDHLQKSCFMRIIDAYKQIAAAGGSKVRFSILAYLGVEFPLELDPWKLLQQHILIDYTSHEGHELTLRVLYRLFGEAEEEPDFFSSTTAASVYEKFLLTVAEALRDSFPPSDKSLSKLLGESPYLPKSVLKILENMCSPGNGDRGEKELHSLNADRVTQGLSAVWSLILLRPPIRDTCLQIALQSAVHHLEEVRMKAIRLVANKLYPLSSISQQIEDFAKEMLFSVTSDDVFELTDAEGSIADSQKGPDVEKVSNEQSSLSGSTKDVSDNRQSCTSESVSPDSVSEAQRCMSLFFALCTKKHSLFRQVFVIYRSTSKAVKQAVHRQIPILVRTMGSSLDLLETISDPPNGSENLLMQVLHTLTDGTTPSKDLISTVKKLHDSKLKDAEVLIPVLPFLSNDEVIPIFPHIVNLPLEKFQTALGRILQGSSQSGPVLSPAEVLIAIHGIDPERDGIPLKKVTDACNACFEQRQTFTQEVIARVLNQLVEQIPPPLLFMRTVLQAIGAFPTLVDFIMGILSRLVTKQIWKYPKLWVGFLKCVQLTKPQSFGILLQLPPAQLENALNRISALKAPLIAHASQPDIQSKLPRAMLVVLGIASDSQVSSQAQTTQTQTSQTQTTQTRTSQTQTIQTQTSQTQTTQTQTSQTQTGETCNSDKDTVTEKSKESSTAS* 1374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0008 1373 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 1241 - -
Pvu10g0008 1373 MobiDBLite consensus disorder prediction 630 662 - -
Pvu10g0008 1373 MobiDBLite consensus disorder prediction 559 582 - -
Pvu10g0008 1373 MobiDBLite consensus disorder prediction 1310 1357 - -
Pvu10g0008 1373 MobiDBLite consensus disorder prediction 559 609 - -
Pvu10g0008 1373 MobiDBLite consensus disorder prediction 945 985 - -
Pvu10g0008 1373 Pfam Symplekin/PTA1 N-terminal 104 323 IPR032460 -
Pvu10g0008 1373 MobiDBLite consensus disorder prediction 339 410 - -
Pvu10g0008 1373 MobiDBLite consensus disorder prediction 335 432 - -
Pvu10g0008 1373 MobiDBLite consensus disorder prediction 640 660 - -
Pvu10g0008 1373 MobiDBLite consensus disorder prediction 411 432 - -
Pvu10g0008 1373 MobiDBLite consensus disorder prediction 1310 1373 - -
Pvu10g0008 1373 Pfam Symplekin tight junction protein C terminal 1090 1268 IPR022075 -
Pvu10g0008 1373 Gene3D - 3 348 IPR011989 -
Pvu10g0008 1373 MobiDBLite consensus disorder prediction 955 985 - -
Pvu10g0008 1373 SUPERFAMILY ARM repeat 34 1197 IPR016024 -
Pvu10g0008 1373 PANTHER SYMPLEKIN/PTA1-RELATED 1 1241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0008 Pvu-Chr10 394815 416387 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0008 K06100 - gmx:100779360 2283.45