Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g0004 ATGAACAAATCAATTTTATCACGTCGCCGAAAATTTTGCCCCCGTCTTATTGCTTATATAAAGGCCCCTCTATATGCTGCTCTTGGCAAGAAGTCACAAATCACACATACACACACTAGTGTGTGGTGTTTGCTTCCATTATCTAATAACTCCTATTTGCTTTTTGTGTGCAACGAAAACCCAAGAATGATGGCATGCCAAGATTGGCCTGAGCCAGTGATTAGAGTCCAAGCCTTGGCTGAAAGTGGCTTAGCCACAATTCCCGAACGTTTTATAAAGCCTAAGTCCCAAAGGCCCACTAATTACACCACTCACGCCTCAAACCAACCCAATGAATCTCACACTACTCATGAGGACATAAACATCCCCGTGATTGACATGAAACACCTCTACAGTGGGGAGGACGGACGGCGAGAGGAGGAGCTCCACCGTGTGGCGGCGGCGTGCCGTGAATGGGGGTTTTTCCAAGTGGTGAACCATGGTGTGAGCCATGAGTTGATGAAGAGTGCTAGGGAGGTGTGGCGTGAGTTCTTTCACCAACCAATTGAGGTGAAAGAGGAGTATGCTAACACACCCCTCACTTATGAAGGGTATGGAAGCAGGTTGGGAGTGAAAAAAGGGGCCATTTTGGATTGGAGTGACTACTTCTTTCTCCATTACATGCCTTGTTCCCTTATGGACCAAGCTAAGTGGCCAAACCTCCCAACATCATTAAGGAATGTGATAACTGAATATGGCGAGGAAGTTGTTAAGCTAGGAGGAAGGGTTCTTGAGATACTGTCAGTGAATCTTGGGCTAAGAAAGGATTTTCTGATGAATGCATTTGGTGGGGAAGATGAAATTGGTGCTTGCTTAAGGGTGAATTTCTATCCAAAGTGTCCACAACCTGACCTCACTATGGGTTTGTCCTCTCATTCAGACCCCGGTGGCATGACCATTCTTCTCCCTGATGAAAATGTGTCTGGACTTCAAGTTCGCAGAGGAGACGATTGGATCACTGTTAAACCCCTCCCAAATGCTTTTATCATCAACATTGGTGATCAAATTCAGGTGATGAGCAATGCAGTTTACAAGAGTATAGAGCACAGGGTGATTGTGAACTCAGACAAAGATAGAGTTTCATTGGCCTTCTTTTATAACCCCAGGAGTGATATACCCATTGAACCTGCCAAGGAGCTTGTGACTGAGGATAGGCCAGCACTATACCCATCAAAAACTTTTGATGAGTATAGACTTTACATTAGGACAAAGGGACCTAGTGGAAAAGCTCAAGTTGAATCTTTGATTTCCAAATGTGATTCAAATTGA 1308 0.4472 MNKSILSRRRKFCPRLIAYIKAPLYAALGKKSQITHTHTSVWCLLPLSNNSYLLFVCNENPRMMACQDWPEPVIRVQALAESGLATIPERFIKPKSQRPTNYTTHASNQPNESHTTHEDINIPVIDMKHLYSGEDGRREEELHRVAAACREWGFFQVVNHGVSHELMKSAREVWREFFHQPIEVKEEYANTPLTYEGYGSRLGVKKGAILDWSDYFFLHYMPCSLMDQAKWPNLPTSLRNVITEYGEEVVKLGGRVLEILSVNLGLRKDFLMNAFGGEDEIGACLRVNFYPKCPQPDLTMGLSSHSDPGGMTILLPDENVSGLQVRRGDDWITVKPLPNAFIINIGDQIQVMSNAVYKSIEHRVIVNSDKDRVSLAFFYNPRSDIPIEPAKELVTEDRPALYPSKTFDEYRLYIRTKGPSGKAQVESLISKCDSN* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g0004 435 Gene3D - 71 416 IPR027443 -
Pvu10g0004 435 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE 65 426 - -
Pvu10g0004 435 PRINTS Isopenicillin N synthase signature 145 162 - -
Pvu10g0004 435 PRINTS Isopenicillin N synthase signature 341 367 - -
Pvu10g0004 435 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 280 381 IPR005123 -
Pvu10g0004 435 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 65 426 - -
Pvu10g0004 435 MobiDBLite consensus disorder prediction 96 116 - -
Pvu10g0004 435 SUPERFAMILY Clavaminate synthase-like 72 416 - -
Pvu10g0004 435 Pfam 2OG-Fe(II) oxygenase superfamily 283 381 IPR044861 -
Pvu10g0004 435 MobiDBLite consensus disorder prediction 95 116 - -
Pvu10g0004 435 Pfam non-haem dioxygenase in morphine synthesis N-terminal 122 222 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g0004 Pvu-Chr10 176098 179443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g0004 76 428 Glycosyltransferase AT5G59530 31.667 1.04e-52 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g0004 - - pvu:PHAVU_010G000300g 897.886