Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02554 ATGGCAGACCCTCAGAAAATTCACCCTGTACACCATGATGTTGAGGCACAAAACCACCCTTCAGCACCATTGGTGCCAAGGAGCATGTCCAAATCTGATGTAGGTGATCCAGAAAGATTGGTACAACAACAACAGCAACACCCTCCACAAGTTCCTGTGATGCATTCCAAGCCACCAAAGAAAAGAAGAAGCTGCTGCTGCAGGTTCTTCTGTTGGCTAATAAGCATATTGCTGATTCTGATTGTGGCAATTGGCATCACAGTTGGGATACTCTACCTTGTGTTCAGACCAAAGCTTCCAAAGTACTCAGTGGATGAACTTAGAGTCACACAGTTTGATCTTGCTGACAACAACAGCTTATCTGTGACATTCAACTTGACAATCACTGCCAGAAACCCCAACAAGAAGATTGGAATATACTATAGAGGTGGCAGCCACATAAGTGCTTGGTACATGGACACAAAACTCTGTGAAGGGTCTTTGCCAAAATTCTACCAAGGTCACCGCAACACCACAGTGCTTAGTATCCCTCTTACAGGGAAAACACAAGATGCTACTGGCATGCAAAATACCCTTCAGCAGCAGCTGCAAGAAACTGGTAATGTGCCTCTCAATTTGAAGGTGAAGCAGCCTGTGAGGATCAAGCTTGGGAAGCTGAAGCTGTTCACAATCAAGTTCAGGGTTAGGTGCAGGATTGTGGTGGACAACCTTAGTGCTGATAGCTCTATCAGAATTCAGAGCAGTAGTTGTAAATTCAGGCTTAGGCTGTGA 771 0.4514 MADPQKIHPVHHDVEAQNHPSAPLVPRSMSKSDVGDPERLVQQQQQHPPQVPVMHSKPPKKRRSCCCRFFCWLISILLILIVAIGITVGILYLVFRPKLPKYSVDELRVTQFDLADNNSLSVTFNLTITARNPNKKIGIYYRGGSHISAWYMDTKLCEGSLPKFYQGHRNTTVLSIPLTGKTQDATGMQNTLQQQLQETGNVPLNLKVKQPVRIKLGKLKLFTIKFRVRCRIVVDNLSADSSIRIQSSSCKFRLRL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02554 256 Gene3D - 94 238 - -
Pumo9g02554 256 MobiDBLite consensus disorder prediction 1 15 - -
Pumo9g02554 256 SUPERFAMILY LEA14-like 86 214 - -
Pumo9g02554 256 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 29 238 - -
Pumo9g02554 256 MobiDBLite consensus disorder prediction 37 51 - -
Pumo9g02554 256 Pfam Late embryogenesis abundant protein 127 231 IPR004864 -
Pumo9g02554 256 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02554 Pumo-Chr9 60530694 60531685 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02554 60 256 EF-hand Containing Proteins AT5G21130 31.472 1.46e-32 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02554 - - gmx:100782663 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02554 9 60530694 60531685 Pumo9g02554 9 60530694 60531685 ECH