Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02553 ATGGTGTGGGGACTCTTCCCCGTCGATCCTCTTTCAGGTGAAGATAAATACTACATTTTCAAAACTGGAGTTTACAAAGTTGGTCGAAAAGGTTGTGATGTGATAATCACTAAAGATAAAGGGGTTTCTCGGGTTCACGCAGAAATAGTTGTTAATACAATGAACCTGGTAAACCCTTTACCGAATGAACGTTCTCATTTGTCACCCAGTATACATATTAGAGATTGCTCCAAGTATGGGACATTTATTAGCAAGAATGTTGGGGCCAAGAAAAAAGTTCATGAGCTACCAAACAAAGAAACAGCATTAGAGGATGGTGACCTTGTTTCTTTTGGCACTGGTACTGCTACCTACAAGTTTTGCCATGTACCGCTCGTTTTTTTCATCTGTTCCTCAAATAAAGTGGATCAATCCCTTGAAGAGAAAATTTCATCAATTGGTGCTAGTATTACTCATACCTTAGGTGAAGGGTGCACGCATGTGCTGGTGGATCAACTCATGCCATTGAAGAAGGATCTTTTTGATGCCTGTTGTCGCCAAAAAATCTTGCTAACTAAAGAAGCTTTCTTTGTCTTCTTTTTCTTCTCTATCCCCTCTTCCTTCTCAAGCAGATATACTCCAACAGTGTCAGCGGAAGGAGAATCTATTAAAATTGCTGACCCCAGAACACGTGAAGATTGCTTGAAAGGATACACTTTTTTGTTGGAATCTGAGAATTTGTATAAATTTGGGGATCAGCTAAAACCTTTATTGGAAGTGGCTGGTGCAAAAGTTGTTTCCTCTGAAGATTTTTGTTCAAATAGCCAAGTTTCAGATTATGGAGAGGATAATCGTGTGGTTTGTGTCATCCCAGGAGGACCAGCATGCAAGTCTAATCTCTTCAGTAAACTAAGTTCCTTGCTTCGAGTGAATGAGATGGATGTAATATGTGCTGCTTTCAGTGGACAGTTAGATCTGTCTATTTTGAAATCACCATGCATACTAGTTTCATCATCATGCTCTACAGATGAGACGATTGTAGCAGATTCAGATACTGAAGTTGAAACAGCCACATCAGCCCGCTCAAACGAGGCATTTAGCAATGGCAATAATGGAAAATATGAAAAAACAGAAGAATTATATGATGATTCTGACCCTTTGGATAAGAGAAAACACGAGAGAATAGAGGCATCCTCAGATGATGTTTCAAGCAGATTACATGACATTAAACGTGCAAAAACAGAAACATCCTTGGATGGTGCTTCTGTCAGATCACATTCTACCAGCTTCAGGAATGATAATGATGGTATCAAAGTAAAGAAAGACAAGGTTGATGATTATGAAAGTGGAAATTCAGATATTGTGTACAGCCAATATTTAGTTGTTCGAGATACAAACATTTGTACTAGCATAAGTACTGCACCAAACAGCAGTGTTCCAAATTTTAAACGCTTCAGAAAGGCACAAACTCAATCTGGTAATAGCTTTGACAATCTTGTTCCATTTGCAAAATATCCGTACAAGGATTCTGACTGTGGAAATGATGAGATGACTGAGCTTGTGAAGGAGGAGAAAAGGCGAAAGAAAATGGAAGCTGTGGCAGATGAACTGTTTAATAATGAGAAGCTGCAGGCAAGAAAACGAGGCACCGTTGGTTCACGAGGCACTGTTGGTTCTCTTCGTGGCATTCTTACTTCATGA 1680 0.394 MVWGLFPVDPLSGEDKYYIFKTGVYKVGRKGCDVIITKDKGVSRVHAEIVVNTMNLVNPLPNERSHLSPSIHIRDCSKYGTFISKNVGAKKKVHELPNKETALEDGDLVSFGTGTATYKFCHVPLVFFICSSNKVDQSLEEKISSIGASITHTLGEGCTHVLVDQLMPLKKDLFDACCRQKILLTKEAFFVFFFFSIPSSFSSRYTPTVSAEGESIKIADPRTREDCLKGYTFLLESENLYKFGDQLKPLLEVAGAKVVSSEDFCSNSQVSDYGEDNRVVCVIPGGPACKSNLFSKLSSLLRVNEMDVICAAFSGQLDLSILKSPCILVSSSCSTDETIVADSDTEVETATSARSNEAFSNGNNGKYEKTEELYDDSDPLDKRKHERIEASSDDVSSRLHDIKRAKTETSLDGASVRSHSTSFRNDNDGIKVKKDKVDDYESGNSDIVYSQYLVVRDTNICTSISTAPNSSVPNFKRFRKAQTQSGNSFDNLVPFAKYPYKDSDCGNDEMTELVKEEKRRKKMEAVADELFNNEKLQARKRGTVGSRGTVGSLRGILTS 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02553 559 FunFam Nibrin 5 121 - -
Pumo9g02553 559 Coils Coil 513 533 - -
Pumo9g02553 559 Pfam FHA domain 25 112 IPR000253 GO:0005515
Pumo9g02553 559 MobiDBLite consensus disorder prediction 344 367 - -
Pumo9g02553 559 CDD FHA_NBN 3 122 - -
Pumo9g02553 559 PANTHER NIBRIN-RELATED 372 539 IPR040227 GO:0006302|GO:0007095|GO:0030870
Pumo9g02553 559 Gene3D - 4 122 - -
Pumo9g02553 559 MobiDBLite consensus disorder prediction 344 381 - -
Pumo9g02553 559 SUPERFAMILY SMAD/FHA domain 10 122 IPR008984 GO:0005515
Pumo9g02553 559 ProSiteProfiles Forkhead-associated (FHA) domain profile. 25 84 IPR000253 GO:0005515
Pumo9g02553 559 CDD BRCT 127 187 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02553 K10867 - gmx:100783205 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02553 9 60521634 60529453 Pumo9g02553 9 60521634 60529453 ECH