Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02549 ATGTGGATCAAGTCCATCTGGCTCTGCAGAGATTCTTGGGGTATTAAAGAGAGTAATTATACAACTAAGAAGACAAAACACACTCAACGCCCAATTCTAATTCTCATCACCGACGAGACAGTAGAAAAAGCCTCCCCCACCGTTGATTTCCTCGACACCTACGAGGGGTTGGTTAGCAAGGGCGATCCGAGCTTCAAGTGGGTCCTACCCAACTCCGAGTGGGACCCGATAACACTTAACTACAAGTCGGGAACGACGTCGTCTCCGAAAGGCGTTGTGCACTGCCACAGAGGAGCCTTCATTGCCGCTTTTGACACGCTTGTTGACTGGGCAGTTCCGAAGAACCCAATTTATCTCTGGACGCTTCCGATGTTCCACTCTAACGGGTGGACCTTCCCGTGGGGGATCGCTGCCGTGGGCGGAACTAACATCTGCGTCCGCAAGTTCAACGCAGAGTTTGTGTACTCTCTGATAAACCGCCACCACGTGGGCCATGGTTATGGGCTAACGGAAACTGAGGGAATTGTGGTGTCATGCGCGTGGAAGGAGAAGTGGAACCGGTTGCCGGCGACGGAGAGGGCGCGGCTGAAGGCGCGGCAAGGGGTGAGAACGGTGGGGGTGACGGAGGTGGACGTGGTGGGTCCCACAGGGGAGAGTGTGAAACGCAATGGGGATACCATCGGGGAGATTGTTGTGAAAGGAGGGTGTGTGATGTTAGGGTACCTTAACGACCCCGAAGGAACCGCGAGATGTTTCAAGAACGGGTGGTTCTACACGGGGGATATCGGTGTCATGCATGAGGATGGGTACGTGGAAATTAAGGATAGGTCAAAGTACGTGATTATCAGCGGCGGCGAGAACATTAGCAGCGTTGAGGTGGAGTCGATGCTGTACGAGCACCCGGCGGGGAACGAGGCGGCGGTGGTGGTGGCGAGACCGCATGAGTATTGGGGAGAGACGCCGTGTGCTTTTGTGAGCTTGAAGGCAGGGATAAAAGAAAAACCAACGGAGAAGGACATAGTTCAGTATTGTAGAAACACCATGCCCCATTATATGATTCCCAAAACTGTGATCTTCAAAGATGAGCTTCCCAAGACGTCTACGGGGAAGATTGAGAAGTTGGTGCTCAAACATATTGCTACCAACATGAATTGA 1155 0.5281 MWIKSIWLCRDSWGIKESNYTTKKTKHTQRPILILITDETVEKASPTVDFLDTYEGLVSKGDPSFKWVLPNSEWDPITLNYKSGTTSSPKGVVHCHRGAFIAAFDTLVDWAVPKNPIYLWTLPMFHSNGWTFPWGIAAVGGTNICVRKFNAEFVYSLINRHHVGHGYGLTETEGIVVSCAWKEKWNRLPATERARLKARQGVRTVGVTEVDVVGPTGESVKRNGDTIGEIVVKGGCVMLGYLNDPEGTARCFKNGWFYTGDIGVMHEDGYVEIKDRSKYVIISGGENISSVEVESMLYEHPAGNEAAVVVARPHEYWGETPCAFVSLKAGIKEKPTEKDIVQYCRNTMPHYMIPKTVIFKDELPKTSTGKIEKLVLKHIATNMN 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02549 384 PANTHER ACYL-ACTIVATING ENZYME 162 383 - -
Pumo9g02549 384 FunFam 2,3-dihydroxybenzoate-AMP ligase 278 384 - -
Pumo9g02549 384 Pfam AMP-binding enzyme C-terminal domain 292 370 IPR025110 -
Pumo9g02549 384 Gene3D - 22 162 IPR042099 -
Pumo9g02549 384 Gene3D - 163 278 IPR042099 -
Pumo9g02549 384 SUPERFAMILY Acetyl-CoA synthetase-like 27 382 - -
Pumo9g02549 384 Pfam AMP-binding enzyme 153 283 IPR000873 -
Pumo9g02549 384 Gene3D - 279 382 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02549 Pumo-Chr9 60451005 60459689 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02549 26 383 EF-hand Containing Proteins AT1G21540 51.084 2.53e-147 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02549 - - gmx:100779857 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02549 9 60451005 60459689 Pumo9g02549 9 60451005 60459689 ECH