Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02546 ATGGAACAACTAAAGCCAAGTTCAGTTAACTCTTCTCCTCTCACACCACTAGGCTTCTTGGACAGAGCAGCCACCGTTTACGGCGACATCCCTTCCGTCGTCTACAACGACACCACCTTCACGTGGTTCCACACGCGCCGCCGATGCCTCCAGCTGGCCTCCGCTCTCTCCTCCCTCGGCATCCGCCGCGGCCACGTCTTCTCCGTGGTGGCCCCCAACGTCCCCGCCATGTACGAGCTCCACTTCGCCGTCCCCTTCGCCGGCGCCGTCCTGAACAACATCAACACCCGCCTCGACGCCCGCACCGTCTCCGTCATCCTCCGCCACGCCAACTCCACGCTCGTCTTCGTCGACTGCGCCTCACGCGACCTCGTCCTCGAAGCCCTATCTCTCTTCCCTAAAGAACACACTCAACGCCCAATTCTAATTCTCATCACCGACGAGACAGTAGAAAAAGCCTCCCCCACCGTTGATTTCCTCGACACCTACGAGGGGTTGGTTAGCAAGGGCGATCCGAGCTTCAAGTGGGTCCTACCCAACTCCGAGTGGGACCCGATAACACTTAACTACAAGTCGGGAACGACGTCGTCTCCGAAAGGCGTTGTGCACTGCCACAGAGGAGCCTTCATTGCCGCTTTTGACACGCTTGTTGACTGGGCAGTTCCGAAGAACCCAATTTATCTCTGGACGCTTCCGATAGTTTGTGTACTCTCTGATAAACCGCCACCACGTGACTCACATGTGCGGTGCACCCGTGGTGCTCAACATGCTAACGAACTCCCCGGACAACAAACCGCTGGATCGCCGCCTCCTGTGGCGGTGCTGTTACGAGCGGAATCACTCGGCTTGAAGGTGGGCCATGGTTATGGGCTAACGGAAACTGAGGGAATTGTGGTGTCATGCGCGTGGAAGGAGAAGTGGAACCGGTTGCCGGCGACGGAGAGGGCGCGGCTGAAGGCGCGGCAAGGGGTGAGAACGGTGGGGGTGACGGAGGTGGACGTGGTGGGTCCCACAGGGGAGAGTGTGAAACGCAATGGGGATACCATCGGGGAGATTGTTGTGAAAGGAGGGTGTGTGATGTTAGGGTACCTTAACGACCCCGAAGGAACCGCGAGATGTTTCAAGAACGGGTGGTTCTACACGGGGGATATCGGTGTCATGCATGAGGATGGGTACGTGGAAATTAAGGATAGGTCAAAGTACGTGATTATCAGCGGCGGCGAGAACATTAGCAGCGTTGAGGTGGAGTCGATGCTGTACGAGCACCCGGCGGGGAACGAGGCGGCGGTGGTGGTGGCGAGACCGCATGAGTATTGGGGAGAGACGCCGTGTGCTTTTGTGAGCTTGAAGGCAGGGATAAAAGAAAAACCAACGGAGAAGGACATAGTTCAGTATTGTAGAAACACCATGCCCCATTATATGATTCCCAAAACTGTGATCTTCAAAGATGAGCTTCCCAAGACGTCTACGGGGAAGATTGAGAAGTTGGTGCTCAAACATATTGCTACCAACATGAATTGA 1521 0.5621 MEQLKPSSVNSSPLTPLGFLDRAATVYGDIPSVVYNDTTFTWFHTRRRCLQLASALSSLGIRRGHVFSVVAPNVPAMYELHFAVPFAGAVLNNINTRLDARTVSVILRHANSTLVFVDCASRDLVLEALSLFPKEHTQRPILILITDETVEKASPTVDFLDTYEGLVSKGDPSFKWVLPNSEWDPITLNYKSGTTSSPKGVVHCHRGAFIAAFDTLVDWAVPKNPIYLWTLPIVCVLSDKPPPRDSHVRCTRGAQHANELPGQQTAGSPPPVAVLLRAESLGLKVGHGYGLTETEGIVVSCAWKEKWNRLPATERARLKARQGVRTVGVTEVDVVGPTGESVKRNGDTIGEIVVKGGCVMLGYLNDPEGTARCFKNGWFYTGDIGVMHEDGYVEIKDRSKYVIISGGENISSVEVESMLYEHPAGNEAAVVVARPHEYWGETPCAFVSLKAGIKEKPTEKDIVQYCRNTMPHYMIPKTVIFKDELPKTSTGKIEKLVLKHIATNMN 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02546 506 Gene3D - 250 400 IPR042099 -
Pumo9g02546 506 Gene3D - 2 238 IPR042099 -
Pumo9g02546 506 FunFam 2,3-dihydroxybenzoate-AMP ligase 400 506 - -
Pumo9g02546 506 Pfam AMP-binding enzyme C-terminal domain 414 492 IPR025110 -
Pumo9g02546 506 SUPERFAMILY Acetyl-CoA synthetase-like 10 504 - -
Pumo9g02546 506 Gene3D - 401 504 IPR045851 -
Pumo9g02546 506 PANTHER ACYL-ACTIVATING ENZYME 264 505 - -
Pumo9g02546 506 Pfam AMP-binding enzyme 265 405 IPR000873 -
Pumo9g02546 506 Pfam AMP-binding enzyme 21 238 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02546 Pumo-Chr9 60408228 60409850 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02546 1 505 EF-hand Containing Proteins AT1G21540 53.261 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02546 - - gmx:100779857 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02546 9 60408228 60409850 Pumo9g02546 9 60408228 60409850 ECH