Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02520 ATGGCTTCTACACCAGCCTTAAAGCGCACAGATTCTGTGGTAGATAATATGCCCGATGCATTGAGGCAGAGCCGGTACCATATGAAGAGGTGCTTCGCTAAGTACCTTGGAAAGGGTAGGAGGATTATGAAACATCATCATTTGATGGAAGAAATGGAACTAGTTATAGATGATAAAAGTGAAAGAAGTCAAGTTTTGGAGGGCATTCTTGGCTTCATATTGAGCTCTACACAGGAAGCTGTTGTTGATCCACCATATGTTGCCTTTGCAATAAGGCCTAATCCAGGTGTTTGGGAATTTGTAAAAGTGAGCTCTGAGGACCTCTCTGTTGAGGCTATCACCCCCACTGACTACCTCAAATTCAAGGAAAGGGTACACGATGAAAAATGGGCAACCGATGAGAACTCATTTGAAGCAGACTTTGGAGCATTCGATTTCCAAGTTCCTCAATTAACCCTCTCTTCTTCAATTGGAAATGGACTCCAATTTACTTCCAAGTTCTTAACATCAAAGTTAACTGGGAAATTGGAGAAAACACAGGCTATAGTGGACTACTTGTTAACACTGAATCATCAGGGAGAAAGCCTGATGATAAATGACAGCCTGAACTCTGCTGCAAAGCTTCAGATGGCACTTGTAGTGGCTGATGCATTCCTCTCAGGACTTCCCAAAGACACTGCATATCAGAATTTTGAACTAAGGTTTAAGGAGTGGGGGTTTGAGAGAGGATGGGGAGATACTGCAGGAAGAGTGAAGGAGACAATGAGAACTCTATCAGAAGTACTCCAAGCACCAGACCCAGTGAACTTGGAGAAATTTTTAAGCAGCTTACCAATAATATTCAATGTTGTCATCTTCTCTGTTCATGGTTATTTTGGGCAAGCAGATGTCCTTGGCTTGCCAGACACAGGTGGCCAGGTAGTTTACATATTGGACCAAGTCAAGTCTTTGGAAGCAGAGTTGCTTCTGAGAATCAAGCAACAAGGGCTAAATGTGAAACCTCAAATTCTTGTGGTAACAAGGCTCATACCTGATGCTCGGGGAACCAAGTGCCACCAGGAGTTGGAACCAATCAGTGATACCAAGCACTCCCACATTCTACGTGTGCCTTTTCAGACAGATAAAGGAATCCTGCGTCAATGGGTTTCTCGCTTTGACATTTACCCCTATCTTGAGAGGTTTACTCAGGCATCCAAGATTCTGGAGTTCATGGAAGGGAAACCAGATCTTGTTATTGGAAATTACACTGATGGAAATTTGGTAGCATCACTAATGGCTAGAAAACTTGGGATAACTCAGGGAACTATAGCACATGCTTTAGAGAAGACAAAGTATGAAGACTCAGATGTCAAGTGGAAAGAGTTGGACCCCAAGTACCACTTCTCATGTCAATTCATGGCTGATACAGTGGCAATGAATGCAGCTGATTTCATCATAACCAGCACATACCAGGAAATTGCTGGAAGCAAAGATAGACCTGGACAATATGAAAGCCATGCTGCATTTACCCTCCCAGGGCTATGTAGGGTTGTTTCAGGGATAAACGTGTTTGATCCTAAGTTCAACATAGCCGCTCCAGGAGCTGACCAGTCTGTGTATTTCCCTTACACAGAGAAAGAAAAAAGGCTCTCTCAATTCCACCCTGCCATTGAGGAACTTCTCTTTAGTAAAGTGGATAACGTTGAGCATATTGGATATCTAGCAGATAGGAGGAAGCCAATCATCTTCTCAATGGCAAGGCTTGATGTTGTGAAGAACTTATCCGGGTTAGTTGAATGGTATGGCAAGAACAAGAGACTGAGAAATTTGGTGAACCTTGTCATAGTTGGGGGCTTCTTTGATCCTTCAAAATCAAAAGATAGGGAGGAAATGGCAGAAATAAAAAAGATACATGACTTAATTGAGAAGTACCAACTAAAGGGTCAATTTAGATGGATTGCTGCACAGACGAATCGGTATCGCAATGGAGAGCTCTACCGTTGCATCGCTGACACAAGAGGAGCCTTTGTGCAGCCTGCATTGTATGAAGCATTTGGATTAACTGTCATTGAAGCAATGAACTGTGGCTTGCCCACTTTTGCTACCAACCAAGGAGGTCCAGCAGAAATTATTGTTGATGGGGTCTCCGGCTTCCACATTGATCCCCTCAATGGAGATGAATCAAGCAAAAAAATTGCTGATTTCTTTGAAAAATGCAAAGTGAATCAATCACAATGGAACGTGATTTCTGCGGCTGGATTGCAGCGCATAAATGAATGCTATACCTGGAAGATTTATGCAAACAAGATGGTAAACATGGGGAACATTTACACCTTTTGGAGGCAAGTTAATAAGGAGCAAAAGGAGGCAAAGCAGAGATACATTCAGATGTTCTATAATCTTATATTCAAGAATTTGGTTAAGACTGTGCCTGTTCCAAGTGATGAACCTCAACAACCAGTGGGCAAGCAGCCCAGTCTCAAATCGCGTAGCACGGGACGTTCACAGTCCACATTGCAAAGGTTATTTGGAAATTAA 2517 0.4271 MASTPALKRTDSVVDNMPDALRQSRYHMKRCFAKYLGKGRRIMKHHHLMEEMELVIDDKSERSQVLEGILGFILSSTQEAVVDPPYVAFAIRPNPGVWEFVKVSSEDLSVEAITPTDYLKFKERVHDEKWATDENSFEADFGAFDFQVPQLTLSSSIGNGLQFTSKFLTSKLTGKLEKTQAIVDYLLTLNHQGESLMINDSLNSAAKLQMALVVADAFLSGLPKDTAYQNFELRFKEWGFERGWGDTAGRVKETMRTLSEVLQAPDPVNLEKFLSSLPIIFNVVIFSVHGYFGQADVLGLPDTGGQVVYILDQVKSLEAELLLRIKQQGLNVKPQILVVTRLIPDARGTKCHQELEPISDTKHSHILRVPFQTDKGILRQWVSRFDIYPYLERFTQASKILEFMEGKPDLVIGNYTDGNLVASLMARKLGITQGTIAHALEKTKYEDSDVKWKELDPKYHFSCQFMADTVAMNAADFIITSTYQEIAGSKDRPGQYESHAAFTLPGLCRVVSGINVFDPKFNIAAPGADQSVYFPYTEKEKRLSQFHPAIEELLFSKVDNVEHIGYLADRRKPIIFSMARLDVVKNLSGLVEWYGKNKRLRNLVNLVIVGGFFDPSKSKDREEMAEIKKIHDLIEKYQLKGQFRWIAAQTNRYRNGELYRCIADTRGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPLNGDESSKKIADFFEKCKVNQSQWNVISAAGLQRINECYTWKIYANKMVNMGNIYTFWRQVNKEQKEAKQRYIQMFYNLIFKNLVKTVPVPSDEPQQPVGKQPSLKSRSTGRSQSTLQRLFGN 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02520 838 Gene3D Glycogen Phosphorylase B; 284 799 - -
Pumo9g02520 838 FunFam Sucrose synthase 529 756 - -
Pumo9g02520 838 Gene3D Glycogen Phosphorylase B; 529 756 - -
Pumo9g02520 838 Gene3D - 150 279 - -
Pumo9g02520 838 Pfam Glycosyl transferases group 1 567 731 IPR001296 GO:0016757
Pumo9g02520 838 PANTHER - 7 808 IPR012820 GO:0005985|GO:0016157
Pumo9g02520 838 FunFam Sucrose synthase 150 279 - -
Pumo9g02520 838 Gene3D - 11 149 - -
Pumo9g02520 838 FunFam Sucrose synthase 12 149 - -
Pumo9g02520 838 MobiDBLite consensus disorder prediction 806 838 - -
Pumo9g02520 838 NCBIfam sucrose synthase 26 804 IPR012820 GO:0005985|GO:0016157
Pumo9g02520 838 MobiDBLite consensus disorder prediction 812 838 - -
Pumo9g02520 838 Pfam Sucrose synthase 9 555 IPR000368 GO:0005985|GO:0016157
Pumo9g02520 838 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 300 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02520 Pumo-Chr9 59968096 59973180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02520 3 809 Glycosyltransferase AT4G02280 57.231 0.0 986
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02520 K00695 - gmx:100808482 1644.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02520 9 59968096 59973180 Pumo9g02520 9 59968096 59973180 ECH