Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02510 ATGGCGTTCCAGAAGATCAAGGTCGCCAACCCCATCGTCGAGATGGACGGAGATGAAATGACTAGGGTTATCTGGAAGTCAATCAAGGACAAGCTCATTTTGCCCTTCTTGGAGTTGGACATCAAGTATTATGACTTAGGCCTTCCTTACCGTGATGAGACCGATGATAAAGTTACAGTTGAAAGTGCAGAAGCAACTCTCAAGTACAATGTAGCAATCAAGTGTGCAACTATTACTCCAGATGAAGCTCGTGTGAAGGAGTTTGGCCTGAAGTCAATGTGGAAAAGTCCAAATGGGACAATTAGGAACATTTTGAATGGAACTGTCTTCAGAGAACCAATTCTTTGCAAAAACATTCCCCGCCTTGTTCCTGGTTGGACAAAGGCAATATGTATTGGAAGACATGCATTTGGTGACCAATATCGGGCTACTGACACAGTAATTAAAGGAGCTGGAAAGCTGAAGCTGGTGTTTGTTCCAGATGGCCAGGGTGAGAAGACTGAATTAGAGGTTTTTAACTTCACTGGTGAAGGAGGTGTTTCATTGGCTATGTACAATACTGATGAGTCTATTCGTTCTTTTGCCGAGGCTTCTATGACAACTGCTTTAGAGAAAAAGTGGCCACTTTATCTTAGCACCAAAAATACAATTCTTAAGAAATATGATGGAAGATTCAAGGACATATTTCAAGAAGTTTATGAGGCAAGCTGGAAATCAAAGTTTGAGGCTGCTGGTATATGGTATGAGCATCGACTCATTGATGATATGGTGGCATATGCACTTAAGAGTGAAGGAGGTTACGTATGGGCATGCAAAAACTATGATGGAGATGTCCAAAGTGATTTCTTAGCTCAAGGTTTTTTAATAACTTTCCCCTTTGATACTTATTGCATAATGGGATGGGTTCAGGTTTGCCCTGATGGAAAGACTATTGAAGCAGAAGCAGCCCATGGCACAGTTACCCGTCACTTTAGGGTTCATCAGAAGGGAGGCGAAACGAGCACAAATAGCATAGCATCCATCTTTGCCTGGACAAGAGGGCTAGCCCACAGGGCAAAACTGGATGACAATGCTAAGCTCTTGGAATTCACTGAAAAGCTAGAGGCAGCTTGCATTGGAGTAGTAGAGACTGGGAAGATGACCAAGGATTTGGCACTTATTATTCATGGATCCAAGCTTTCAAGAGAGCACTATTTGAACACAGAGGAATTCATCGATGCCGTGGCAGCTGAGCTTAGAGCGAAGCTTTCTGCATAG 1257 0.4296 MAFQKIKVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYYDLGLPYRDETDDKVTVESAEATLKYNVAIKCATITPDEARVKEFGLKSMWKSPNGTIRNILNGTVFREPILCKNIPRLVPGWTKAICIGRHAFGDQYRATDTVIKGAGKLKLVFVPDGQGEKTELEVFNFTGEGGVSLAMYNTDESIRSFAEASMTTALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEASWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFLITFPFDTYCIMGWVQVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLLEFTEKLEAACIGVVETGKMTKDLALIIHGSKLSREHYLNTEEFIDAVAAELRAKLSA 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02510 418 Pfam Isocitrate/isopropylmalate dehydrogenase 7 408 IPR024084 -
Pumo9g02510 418 NCBIfam isocitrate dehydrogenase (NADP(+)) 4 417 IPR004790 GO:0004450|GO:0006102
Pumo9g02510 418 PIRSF IDH_NADP 1 418 IPR004790 GO:0004450|GO:0006102
Pumo9g02510 418 FunFam Isocitrate dehydrogenase [NADP] 3 418 - -
Pumo9g02510 418 Gene3D Isopropylmalate Dehydrogenase 3 418 - -
Pumo9g02510 418 PANTHER NADP-SPECIFIC ISOCITRATE DEHYDROGENASE 4 417 IPR004790 GO:0004450|GO:0006102
Pumo9g02510 418 SMART Iso_dh_2 11 408 IPR024084 -
Pumo9g02510 418 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 3 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02510 Pumo-Chr9 59818416 59823894 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02510 K00031 - gmx:100791166 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02510 9 59818416 59823894 Pumo9g02510 9 59818416 59823894 ECH