Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02202 ATGGATTACTATGATTTCCTTGGCACATTTAAGAATAAAGAGGGATTAACTCCTCTCACCGTCCTAGCCACTAGACCGTCGGCCTTCAAAAGTGCAAGCAAACTCTCATGGTGGAGGCGAATCCTGTACCACTGTATACTTGTAGAACCACTGGACCCTAAAAGTCAAATGAAGGCGGATTTGGGAAAGATGGAGGAGCATCCTAAGTCTGATAAAGTTAATTATCCAAAGAACTACGCCACATTATATGAATTCTTTGCTGGATCGTTAAGTGTTGCTGCTGCTCTAATTGGCAAAATGTCTTGGAAAAAGAATGAGCTTGACACAGAAAACCCACCACTCAATAGTCAGGTTGGACTTTTGCCACCTAATTATGAAACCTTTCAACATTTTGTCAGGTCTGCATTTGTATTTACTCTTGGCCTTTCAGGAGTAGTAGACATAAAGAAATTAAAGAAGACAAAAGAGAGGCATCAATGGGGTTGTCAGCTCTTGAAGGAACTAATGAAAACACCTGTTCAAGCATACATTGGAGACTGGTTTAAACCGCCCGGTATAGAAATTGACCAAGGCGTTCTTCAAGCTTATAGCGAACATATACAAGCATACACGGGAGGCGGGGGTGAACCACACAATGCTAAGGATCCAAGGAAGCAAGAAAATCCTTGGCCTGGAAGTCAAGGACCAATGTCTCAAGGAGAAATTAGCCACTCAAACGAGGAAGAAGAACAAAACCCAAAGGCTGATGGCAAAATAGAAACTTTAAGCGACATACGGGATAAACCATTAGAAAGAAAACCAAAGGCTGATGACAAAACAGTAACTGTAAGTGACATACGGGATACATCAGTTTTGGTTGCAGCAAGAAATGGCATAGTTGAAATGGTGAATGAAATTTTATCTGAGATTCCAAATGTCATCTATGAAACTAACTCACAAGAAGAAAATGTGTTGCTGGTCGCAGTGAGGAACAAGAAACCTCTTGTTGTTGAAAATTTGAAAAAGAAATTTGAAAAAGAAAAACCAGAAGTTTGGAATACCTTAACTATGGCAGTAGATAAGAATGGGAAGACCATGTTGCACAAGGCAGCATATGCTTCACAAGACTATAAGCCTTGGCAAATATCTGGTTCTGCCTTACAGATGATGTGGGACGTAAATTGGTTTCAGTATATTAAGAGGCTTGCGCCAGAGCACTTTCATCTTAGAAGCGACAATTTTAATCGAACCGCAAGCGAATTGTTCAAGGAAGAACATAATCATCTTAGAAAGGAGAGTGGCGATTGGCTGAGGGAGACATCTGAATCTTGCTCTGTTGTGGCTGCGCTTGTTGCAGGTGTTTCCTTTGCTACAGCAGCCACCATCCCCGGTGGCAACGATGATAATGGTATGCCTCATTTAGAAGACAAGCCTGCATTCGACGCATTTGTTATTGCTTCGCTAATTGGACTTTGCTTCTCAGTCACTGGACTCATAATGTTCCTTACTATACTCACTTCTCGAAAGTTACACACAGAGTTTCGCAGAGATTTGCCACTCAAACTTCTTCTTGGCTTAAGTTCTCTTTTCGTATCCATTGCCGCATTGCTTGTTTCTTTCTGCACCAGCCATTCTTTTCTGTTCAGTCATAAATACAAAATGGTCATATTCCCCATTTATGTATCCACTTGTTTTCCTGTCACTTTCTATGCCGTGGCACAGTTGCCACTCTACTTTGATCTTCTAACAGCCATTTTATTTAAGGTGCCAACGACAAGTAGTGAAGGAGACATTTTATAG 1779 0.4109 MDYYDFLGTFKNKEGLTPLTVLATRPSAFKSASKLSWWRRILYHCILVEPLDPKSQMKADLGKMEEHPKSDKVNYPKNYATLYEFFAGSLSVAAALIGKMSWKKNELDTENPPLNSQVGLLPPNYETFQHFVRSAFVFTLGLSGVVDIKKLKKTKERHQWGCQLLKELMKTPVQAYIGDWFKPPGIEIDQGVLQAYSEHIQAYTGGGGEPHNAKDPRKQENPWPGSQGPMSQGEISHSNEEEEQNPKADGKIETLSDIRDKPLERKPKADDKTVTVSDIRDTSVLVAARNGIVEMVNEILSEIPNVIYETNSQEENVLLVAVRNKKPLVVENLKKKFEKEKPEVWNTLTMAVDKNGKTMLHKAAYASQDYKPWQISGSALQMMWDVNWFQYIKRLAPEHFHLRSDNFNRTASELFKEEHNHLRKESGDWLRETSESCSVVAALVAGVSFATAATIPGGNDDNGMPHLEDKPAFDAFVIASLIGLCFSVTGLIMFLTILTSRKLHTEFRRDLPLKLLLGLSSLFVSIAALLVSFCTSHSFLFSHKYKMVIFPIYVSTCFPVTFYAVAQLPLYFDLLTAILFKVPTTSSEGDIL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02202 592 Pfam Domain of unknown function 428 538 IPR026961 -
Pumo9g02202 592 PANTHER CASKIN 12 577 - -
Pumo9g02202 592 MobiDBLite consensus disorder prediction 236 271 - -
Pumo9g02202 592 MobiDBLite consensus disorder prediction 202 271 - -
Pumo9g02202 592 SUPERFAMILY Ankyrin repeat 281 366 IPR036770 -
Pumo9g02202 592 Gene3D - 226 443 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02202 Pumo-Chr9 54667939 54779918 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02202 286 533 Miscellaneous Gene Families AT3G09550 23.776 2.21e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02202 - - gmx:100799322 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02202 9 54667939 54779918 Pumo9g02202 9 54667939 54779918 ECH