Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02199 ATGGAGAAGAGGTTCAAGGAGGCAGTGGTAAGCAAGGGGTTAGAAGCCGAAGTAAAGGACATGGATTGGGAGAGCACCTTCTTCTTGCGCCATCTCCCAGACTCCAACATCTCTGAAATCCCTGATCTCAGCCAAGAGTACAGGGATGCAATGAAGGAATTTGCACAAAAATTGGAGAAACTTGCAGAGGAATTACTAGACCTGTTATGTGAAAATCTTGGATTAGAGAAGGGGTACTTGAAAAAGACGTTTTATGGATCAAAGGGTCCAAATTTTGGGACAAAGGTAGCAAACTACCCAGCGTGCCCAAAGCCAGAGTTGGTGAAGGGTCTTCGTGCCCATACGAATGCAGGTGGAATTATCCTTCTCTTGCAAGATGACAAGTGGGGAGGGGAAAAGGGTCAAATTGGGAAGGATGAGGCAGTGGGGAAGGGGAAGGGGAAGGGGAAGGGGAAGGGGAAAGAGAGTGAGACCGTGGAGGAGTAG 486 0.4835 MEKRFKEAVVSKGLEAEVKDMDWESTFFLRHLPDSNISEIPDLSQEYRDAMKEFAQKLEKLAEELLDLLCENLGLEKGYLKKTFYGSKGPNFGTKVANYPACPKPELVKGLRAHTNAGGIILLLQDDKWGGEKGQIGKDEAVGKGKGKGKGKGKESETVEE 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02199 161 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 10 131 - -
Pumo9g02199 161 MobiDBLite consensus disorder prediction 131 161 - -
Pumo9g02199 161 Coils Coil 44 71 - -
Pumo9g02199 161 MobiDBLite consensus disorder prediction 130 161 - -
Pumo9g02199 161 SUPERFAMILY Clavaminate synthase-like 14 131 - -
Pumo9g02199 161 Gene3D - 1 140 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02199 Pumo-Chr9 54639178 54640321 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02199 14 130 Glycosyltransferase AT5G59530 29.060 2.59e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g02199 K05933 - gmx:100820256 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02199 9 54639178 54640321 Pumo1g00320 1 4786930 4787834 PCT