Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01913 ATGGATGCTTGGACTTGGACTTGGTGGGCGACGATAGAAAGAAAGATTAAAATGGAAGCAAGTACATTATTGTCTCAGGCAGTTACTGTTATTATGGAACTCAAACAACTCCTTCTGCTTCTGATTCTAACGCTTCTTTTTGCAACTGCCACGCCTGAATCTGAGTACGTTCGACCTCTTCCTCGTAAAACCTTAACCATCCCATGGGATTCAATTTCCAAGGCCCACTCCTCTTACCCTCAACAGGTGCACATTTCTCTGGCAGGAGACAAGCACATAAGAGTTACATGGATAACCGATGATAAACATTCACCTTCATATGTAGAATACGGAACATTACCTGGGAGATATGACTCAATAGCTGAAGGAGAGTGCACCTCTTATAACTATCTGTTATATAGCTCAGGAAAGATACACCATGCTGTAATTGGACCTTTGGAAGACAACACTGTGTACTTTTACCGGTGTGGTGGAAAAGGTCCTGAGTTTGAGCTCAAAACTCCTCCAGCTCAATTTCCAATTACTTTTGCTGTTGCTGGGGATCTGGGTCAAACTGGTTGGACTAAATCAACACTGGCTCACATTGATCAATGCAAATATGATGTCTACCTGCTACCAGGAGACCTTTCATATGCTGATTGTATGCAGCATCTGTGGGACAATTTTGGGCAACTTGTGGAGCCGCTTGCGAGTACAAGGCCATGGATGGTAACAGAGGGAAACCATGAAGAGGAGAACATACTGTTGTTAACGGATGAGTTTGTGTCCTATAATTCCAGATGGAAAATGCCATTTGAGGAAAGTGGATCAACTTCAAATCTCTATTATTCTTTTGAAGTTGCAGGTGTTCATGTCATCATGCTTGGCTCATATGCAGATTATGATGTGTACTCTGAACAATATAGATGGCTAAAGGAAGATCTGTCAAAGGTGGATAGGAAAAGGACACCTTGGCTGCTTGTGCTATTTCATGTGCCATGGTATAATAGTAACAAGGCTCATCAAGGTGCAGGGGATGATATGATGGCTGCTATGGAGCCGTTGCTCTATGCTGCTAGTGTTGATTTAGTTATCACTGGCCATGTTCATGCTTATGAACGTTCAAAACGTGTGTATAATGGAAGATTGGATCCCTGTGGTGCTGTTCATATAACTATTGGTGATGGAGGAAACAGAGAAGGCTTAGCTCAAAAGTATATAAACCCACAGCCAAAGTGGTCAGAATTCCGTGAAGCCAGTTTTGGTCATGGTGAGCTGAAGATTGTAAACTCCACTCATGCCTTCTGGAGTTGGCACAGGAATGATGATGATGAATCAGTAAAAGCTGATGATATCTGGATAACCTCTTTGGTCAGCTCAGGATGTGTTGATCAGAAGACACATGAACTCAGAAGTACACTTATGACACCCTAA 1413 0.4253 MDAWTWTWWATIERKIKMEASTLLSQAVTVIMELKQLLLLLILTLLFATATPESEYVRPLPRKTLTIPWDSISKAHSSYPQQVHISLAGDKHIRVTWITDDKHSPSYVEYGTLPGRYDSIAEGECTSYNYLLYSSGKIHHAVIGPLEDNTVYFYRCGGKGPEFELKTPPAQFPITFAVAGDLGQTGWTKSTLAHIDQCKYDVYLLPGDLSYADCMQHLWDNFGQLVEPLASTRPWMVTEGNHEEENILLLTDEFVSYNSRWKMPFEESGSTSNLYYSFEVAGVHVIMLGSYADYDVYSEQYRWLKEDLSKVDRKRTPWLLVLFHVPWYNSNKAHQGAGDDMMAAMEPLLYAASVDLVITGHVHAYERSKRVYNGRLDPCGAVHITIGDGGNREGLAQKYINPQPKWSEFREASFGHGELKIVNSTHAFWSWHRNDDDESVKADDIWITSLVSSGCVDQKTHELRSTLMTP 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01913 470 Gene3D - 79 170 - -
Pumo9g01913 470 PANTHER ACID PHOSPHATASE RELATED 39 448 IPR039331 GO:0003993
Pumo9g01913 470 SUPERFAMILY Metallo-dependent phosphatases 173 438 IPR029052 -
Pumo9g01913 470 Pfam Purple acid Phosphatase, N-terminal domain 80 160 IPR015914 GO:0003993|GO:0046872
Pumo9g01913 470 Pfam Iron/zinc purple acid phosphatase-like protein C 381 439 IPR025733 -
Pumo9g01913 470 SUPERFAMILY Purple acid phosphatase, N-terminal domain 75 169 IPR008963 GO:0003993|GO:0046872
Pumo9g01913 470 CDD MPP_PAPs 171 449 IPR041792 -
Pumo9g01913 470 Pfam Calcineurin-like phosphoesterase 175 365 IPR004843 GO:0016787
Pumo9g01913 470 Gene3D - 171 458 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01913 Pumo-Chr9 48428274 48431194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01913 80 457 Miscellaneous Gene Families AT2G03450 26.106 1.41e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01913 K22390 - gmx:100787977 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01913 9 48428274 48431194 Pumo9g01913 9 48428274 48431194 ECH