LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo9g01889	ATGGTTGGAGCCGTTCTCCTCAACGCCAACTTCAAGCTTCGTTTCTCACGCATATCAAGCCAGGCCCGTTCCCCCTTACCCGTCAAGCCCGCACCCGTCAGAATGCCCACTCCCCCTCACCCCCACTGGGCCTCCTTGCAGGCCGACATTGAAGCCCACCTCAAACAAACCATTCCCATCAAAGAACCCCTCGAGGTGTTCGAGCCCATGCACCACCTCGCCTTCGCCGCCCCCCGGACCACTGTGCCCGCCCTCTGCCTTGCCGCCTGCGAGCTCGTCGGCGGCCACCGCCGACAAGCCATGGCTGCGGCCTCGGCCTTGTTACTCAACCTGGCTAATGCACACGCCCACGAACACCTTCCTCTCACCGACAGGCCCAAGCCCAGGCCCAGGCCCAGGCCCGAGCCCGCTCCCGCTCCCGCGTACGGGCCCAACATAGAACTTCTGACCGGGGACGGGATTGTTCCGTTTGGGTTTGAGTTGTTGGCGAGGCCGGATGGGCCGGCACGTGCGAGCCCGGAGCGGGTCCTGCGTGCGATAATTGAGATATCACGTGCGGTGGGGTCGGGAGGGTTGCAAGAAGCGCAGTACATGAAAAAAACGTTGTTGGAGAGTGATGAGGAGGTGCGCCACGTGGAAAGCATGCAGCGCGTCGTTTTGGAGAAAAGGGACGGTGGGCTGCATGCATGTGGGGCTGCGTGTGGTGCCATATTGGGAGGTGGGAGTGAGGACCAAATTGAGAGGCTGAGAAAATTCGGGTTTCATGTGGGGATCATGAGGGGAATGCTACAAAAGGGTTTCAAGGAAAACCATGTGGAAGAGGAGAGAAGGCTTGCACTCAAGGAATTGCAATTTTTCAAGGACACAGATGTTGATGTAATTTCTAGTTTTATTAGTTTCTAG	903	0.5836	MVGAVLLNANFKLRFSRISSQARSPLPVKPAPVRMPTPPHPHWASLQADIEAHLKQTIPIKEPLEVFEPMHHLAFAAPRTTVPALCLAACELVGGHRRQAMAAASALLLNLANAHAHEHLPLTDRPKPRPRPRPEPAPAPAYGPNIELLTGDGIVPFGFELLARPDGPARASPERVLRAIIEISRAVGSGGLQEAQYMKKTLLESDEEVRHVESMQRVVLEKRDGGLHACGAACGAILGGGSEDQIERLRKFGFHVGIMRGMLQKGFKENHVEEERRLALKELQFFKDTDVDVISSFISF	300

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo9g01889	300	MobiDBLite	consensus disorder prediction	118	132	-	-
	Pumo9g01889	300	Gene3D	Farnesyl Diphosphate Synthase	39	300	IPR008949	-
	Pumo9g01889	300	MobiDBLite	consensus disorder prediction	118	143	-	-
	Pumo9g01889	300	SUPERFAMILY	Terpenoid synthases	42	259	IPR008949	-
	Pumo9g01889	300	PANTHER	FARNESYL DIPHOSPHATE SYNTHASE	40	259	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo9g01889	Pumo-Chr9	48046785	48047687	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo9g01889	K13789		-	gmx:100170743	426.787

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo9g01889	9	48046785	48047687	Pumo9g01889	9	48046785	48047687	ECH