Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01882 ATGGATGATGGATTAAATGTCAAGGAGAGGATTTACTATTTGAGTTCCATGATGGACATGGGAAGTGAAGTACAAGTTCGTGCTAGCGGTGGCCTTCTTGCAATATTAGAGAATGAAAGGATTGTAGATACTCTTGAGCAAAAAGAATCTGGAAATACATCAATTACAATAGATTCTGTAGCAGAAATTTCACTAAATAACTTTCTCAAACTTGATGCAGCAGCTCATGAAGCATTACAAATATTCCAAATAGACAAGCACCCAAGCCACATGGGAATTGGTAGAGCAAAAGAAGGGTTTTCAGTATTTGGAATGATGAATAAGTGCGTGACTCCAATGGGTAGACGTCTTTTGAGAAATTGGTTCTTAAGGCCTATACTTGATCTTGAAGTTCTAAACTACCGTTTAAATTCTATATCTTTTTTTCTATGCTCAGAAGAACTTGTTGCTTCTTTACGAGAAACCTTGAAATCTGTGAAGGACATCCCCCACTTGCTGAAGAAATTTGATTCTCCAAGCTCTATATGCACTAGCTCTGATTGGACAGCTCTTCTGAAGAGTATTTGTGCCCTGTTGCATGTAAACAAGATTTTTGAAGTTGGAATTTCCGAAGGTCTTCGAGAAGAATTGAAGTATTTAAACTTGGATATTGTTGAGAAGGCAAGTTCATGCATAACAGCAGAACTTGGTTATGTCTATGAACTGGTAATTGGTGTTATTGATGTAAATAGAACTAAAGAGAAGGGATATACGACAGTGGTGAAAGAAGGTTTCTGTGATGAGTTGGATGAGCTGAGGCAAATATACGAGGAACTGCCGGAATTTCTGGAAGAGGTTTCATCATTGGAATTAGCACAACTTCCCGTTCTATGCAAGGACAAGCGCATTCCATGTATTGTTTATATACAGCAAATAGGATATTTAATGTGTATCTTTGAAGAAAAACCCGAACAAACCACTCTGGAGAAACTTGTAGATTGGGAATACACATTTTGTGATACAGATGGAGAGACAAAAAGATACTTTTATCGTACGCCAAAGACACGAGAATTGGACAGTCTGCTGGGAGATATCCACCATAAAATTCTAGATATGGAGAGGGCGATCACCAGAGACTTGTTTTCACGTATACTGTTGTTCCAAACCCATTTGATAAAGGTGGCAACTTTTGCAGCTGAACTGGACTGCTTCTTGTCAATGGCATTGGTTGCACGGCAGAACAATTATGTCAGGCCTTCGTTGACTGAAGAAAATTTGCTTGATATAAAAAATGGAAGGCATGTTTTGCAGGAAATGACTGTAGACACATTTATTCCTAATGACACTAAGATTCTTCATGATGGAAGAATTAATATCATCACTGGTCCTAATTTTTCTGGAAAAAGTATCTATATAAAGCAGGTTGCTATAATTGTTTTTCTCTCCCACATTGGCAGTTTTGTGCCAGCTGATGCAGCAACTGTGGGTCTAACAAATAGGTATCATTTCGTATGA 1494 0.3795 MDDGLNVKERIYYLSSMMDMGSEVQVRASGGLLAILENERIVDTLEQKESGNTSITIDSVAEISLNNFLKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRNWFLRPILDLEVLNYRLNSISFFLCSEELVASLRETLKSVKDIPHLLKKFDSPSSICTSSDWTALLKSICALLHVNKIFEVGISEGLREELKYLNLDIVEKASSCITAELGYVYELVIGVIDVNRTKEKGYTTVVKEGFCDELDELRQIYEELPEFLEEVSSLELAQLPVLCKDKRIPCIVYIQQIGYLMCIFEEKPEQTTLEKLVDWEYTFCDTDGETKRYFYRTPKTRELDSLLGDIHHKILDMERAITRDLFSRILLFQTHLIKVATFAAELDCFLSMALVARQNNYVRPSLTEENLLDIKNGRHVLQEMTVDTFIPNDTKILHDGRINIITGPNFSGKSIYIKQVAIIVFLSHIGSFVPADAATVGLTNRYHFV 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01882 497 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 18 493 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Pumo9g01882 497 FunFam DNA mismatch repair protein MSH5 69 295 - -
Pumo9g01882 497 Pfam MutS domain III 76 401 IPR007696 GO:0005524|GO:0006298|GO:0030983
Pumo9g01882 497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 409 489 IPR027417 -
Pumo9g01882 497 Pfam MutS domain V 452 493 IPR000432 GO:0005524|GO:0006298|GO:0030983
Pumo9g01882 497 SMART DNAend 97 433 IPR007696 GO:0005524|GO:0006298|GO:0030983
Pumo9g01882 497 SUPERFAMILY DNA repair protein MutS, domain III 72 408 IPR036187 -
Pumo9g01882 497 Gene3D - 69 295 - -
Pumo9g01882 497 Gene3D - 409 496 IPR027417 -
Pumo9g01882 497 Pfam MutS family domain IV 257 359 IPR007861 GO:0005524|GO:0006298|GO:0030983
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01882 K08741 - gmx:100797567 946.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01882 9 47945920 47952931 Pumo9g01882 9 47945920 47952931 ECH