Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01862 ATGTTGGCCTTTGCAAAATCACAAGTTGATTATATTTTGGGCTCTAATCCAATGGGTATGAGCTACTTGGTAGGCTATGGTCCTAAATTCCCGCGGAGGGTGCACCATAGGGGTGCATCCATTGAATCATATGGGGAAAATAAGGGTTTTATTGGGTGCACTCAGGGTTATGATAACTGGTATGGACGCGTTGAACCCAATCCAAATGTACTCATTGGGGCACTCGTTGGTGGGCCCGATATCAAGGACCAGTTTAAAGATGAGAGACGAAATTACATTCAAACAGAGGCTTGCACCTACAATACAGCAGCACTAGTAGGGCTTTTTGCTAGATTGCATCAAGCACATGGTGATGTTTATTACAATGAAACCCCTTTGGTAGCTTCTAGCTAA 393 0.4377 MLAFAKSQVDYILGSNPMGMSYLVGYGPKFPRRVHHRGASIESYGENKGFIGCTQGYDNWYGRVEPNPNVLIGALVGGPDIKDQFKDERRNYIQTEACTYNTAALVGLFARLHQAHGDVYYNETPLVASS 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01862 130 PANTHER ENDO-1,4-BETA-GLUCANASE 2 115 - -
Pumo9g01862 130 Pfam Glycosyl hydrolase family 9 2 108 IPR001701 GO:0004553|GO:0005975
Pumo9g01862 130 SUPERFAMILY Six-hairpin glycosidases 2 119 IPR008928 GO:0005975
Pumo9g01862 130 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 11 37 IPR018221 -
Pumo9g01862 130 Gene3D - 1 129 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01862 Pumo-Chr9 47793443 47793835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01862 1 111 Glycoside Hydrolase AT2G32990 80.180 3.53e-62 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01862 - - gmx:100786912 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01862 9 47793443 47793835 Pumo9g01862 9 47793443 47793835 ECH