Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01860 ATGCTCTGCTTCTCTCTGAAACAGAGCATGGCTCCTCTGGCATTCTCCTTCTTCTTTATCCTTATCTCATTATTTTCTTCATCATCAGAAGCGGGATCGATCGGAATAAACTATGGAAGGATTGCGAACGACCTACCTACACCAGCCAAAGTGGTGGAGCTTCTGAAGACTCAGGGTCTCAACCGTGTGAAGCTCTACGACACCGACGCCACCGTCTTAACCGCGTTTGCAAACTCAGGAATCAAGGTGGTGGTTGCCATGCCAAACGAGCTTCTCTCCAACGCCGCGGCGGACCAGTCCTTCACCGACGCGTGGGTCCAAGCCAACATCTCCAACTACTACCCGGCCACGCAAATCGAAGCCATAGCCGTTGGAAACGAAGTGTTCGTCGACCCGAACAACACCACCAAGTTCCTCGTACCCGCCATGAAGAACGTGCACGCTTCTCTTGTCAAGTACAACCTCGACAAAAACATTAAAATATCCTCACCGATCGCGCTCTCCGCGCTCCAATCCTCGTTCCCCGCCTCATCCGGTTCCTTCAAAACCGAACTCGTTGAACCGGTTATTAAACCCATGCTGGATTTACTCCGCCAAACCGGTTCCTACTTAATGGTGAATGCGTATCCTTTCTTCGCTTACGCTGCAAACTCTGATAAAATTTCCTTAGACTACGCGCTCTTCAAGGAAAACCCCGGCGTGGTCGATTCCGGTAATGGTTTCAAATACACGAACCTATTCGACGCTCAAATCGACGCCGTTGTTGCTGCCATGTCAGCACTCAAATACGACGACGTTAAGATCGCAGTCTCTGAAACCGGTTGGCCTTCCGCAGGGGACTCTAATGAGATTGGAGCCGGCCCCGACAATGCGGCGTCGTATAACGGAAACTTGGTTAAGCGCGTGTTGAGTGGGAGTGGGACCCCCTTAAGGCCCAATGAGTCATTCGATGTTTTCCTCTTCGCGCTCTTCAATGAGAACCAGAAAACGGGGCCCACATCGGAGAGGAACTACGGGCTGTTTTATCCCAGTGAGAAGAAGGTTTATGATATTCCGCTCACGGCGGAGGAGATTAAGGAGGCGCCGCCGTCCGGCGTCGGGAAGAGCCAGGTTCCGGTGAGTGGAGACGTGTCGACGACGTCGTCTAAGGGTCAGACGTGGTGCGTGGCGAATGGCGGTTCTTCGGAGAACAAGCTGCAGAACGCTCTTAATTACGCTTGCGGAGAGGGTGGGGCTGATTGCACTCCCATTCAACCAGGTGCCACGTGTTACAATCCTAACACGTTGGAGGCTCATGCTTCCTACGCTTTCAACAGTTACTATCAGAAGAAGGCACGTGCCACCGGCACGTGCGATTTTGGTGGTGCTGCTTATGTCGTCACTCAGCCTCCTAAGTATGGTAACTGCGAATTCCCCACAGGATACTGA 1428 0.5245 MLCFSLKQSMAPLAFSFFFILISLFSSSSEAGSIGINYGRIANDLPTPAKVVELLKTQGLNRVKLYDTDATVLTAFANSGIKVVVAMPNELLSNAAADQSFTDAWVQANISNYYPATQIEAIAVGNEVFVDPNNTTKFLVPAMKNVHASLVKYNLDKNIKISSPIALSALQSSFPASSGSFKTELVEPVIKPMLDLLRQTGSYLMVNAYPFFAYAANSDKISLDYALFKENPGVVDSGNGFKYTNLFDAQIDAVVAAMSALKYDDVKIAVSETGWPSAGDSNEIGAGPDNAASYNGNLVKRVLSGSGTPLRPNESFDVFLFALFNENQKTGPTSERNYGLFYPSEKKVYDIPLTAEEIKEAPPSGVGKSQVPVSGDVSTTSSKGQTWCVANGGSSENKLQNALNYACGEGGADCTPIQPGATCYNPNTLEAHASYAFNSYYQKKARATGTCDFGGAAYVVTQPPKYGNCEFPTGY 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01860 475 SMART X8_cls 386 471 IPR012946 -
Pumo9g01860 475 Pfam X8 domain 386 457 IPR012946 -
Pumo9g01860 475 Pfam Glycosyl hydrolases family 17 34 351 IPR000490 GO:0004553|GO:0005975
Pumo9g01860 475 ProSitePatterns Glycosyl hydrolases family 17 signature. 266 279 IPR000490 GO:0004553|GO:0005975
Pumo9g01860 475 Gene3D Glycosidases 32 360 - -
Pumo9g01860 475 Gene3D - 380 471 - -
Pumo9g01860 475 SUPERFAMILY (Trans)glycosidases 34 351 IPR017853 -
Pumo9g01860 475 FunFam Glucan endo-1,3-beta-glucosidase 4 381 474 - -
Pumo9g01860 475 FunFam Glucan endo-1,3-beta-glucosidase 3 33 356 - -
Pumo9g01860 475 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 22 458 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01860 Pumo-Chr9 47778962 47781506 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01860 29 464 Glycoside Hydrolase AT5G55180 73.853 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01860 - - gmx:100803406 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01860 9 47778962 47781506 Pumo9g01860 9 47778962 47781506 ECH