Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01845 ATGTCTTGTCCTGTTATGCTTTCTGTTATTCTCGTTTCCCTCAAAGATAGCAAAGCCACATCTAACAACACCACCGCAATCCTCATCAACAACTTTTCTCAATTCGTATTGATCCTTTTGTCATTTTCTACCTCTTCAATCCAAATTCCTGCGGAGATAAGCAAATCAAATGGAAACCATTTACTTGTCAATGATAAATACAAATACAAATCAATGTGGATCCGTGCATACTCGTCTCTGTGGATGCTAGTGAGTGTCTCACTAATCATATACTTGGGTCATCTTTACATCTGGGCAATGGTTGTGGTTATCCAAATATTTATGGCCAGTGAGCTCTTCAATCTACTTAGAAGAGCAACTCAAGATAAACGTCTCCCTAAGTTTAAGCTCTTGAACTGGCATTTTTTCTTCACAGCAATGCTATTCGTATATGGCCGTATTCTCAGTCAACAACTTGTGAATACAGTGACCTCAGATAAATTCTTGTACAGATTTGTGAGCAACCTGATCAAGTATCAGATGGTTATATGTTACTTCTTATATATTGCTGGTTTTGTATGGTTTATTCTTTCATTGAAGAAGAGATATTACAAGTATCAGTTTGGCCAGTATGCATGGACACATATGATACTTATTGTTGTGTTTACCCAGTCTGCGTTCACTGTAGCCAACATATTTTCAGGGATATTCTGGTTTATTTTCCCTGCATCCCTTATTGCTATGAATGATGTTGGTGCATATTTCTTCGGTTTCTTTTTTGGGAGAACACCTCTGATCAAGCTTTCTCCAAAGAAAACATGGGAAGGTTTCATTGGAGCATCTGTTGCCACTATGATTGCTGCATTTACGTTTGCAAACTTCTTGGGTCGCTTCCAGTGGCTAACATGTCCAAGGAAGGATTTATCAACTGGTTGGCTTCAGTGTGACCCTGACCCAATTTTTAAACCAGAGTACATTCCATTGCCAGGATTGATTTCTCATTGGCTTCCTTGGAAAGAGATAGCAGTTTTGCCAGTACAGTGGCATGCCTTGTGGATGGGACTATTTGCGTCAATCATAGCACCATTTGGAGGTTTTTTTGCTAGTGGTTTCAAAAGAGCTTTTAAAATCAAAGACTTCGGTGACAGCATACCTGGACATGGTGGATTTACAGACAGAATGGACTGCCAGATGGTAATGGCTGTTTTTGTCTACATTTACCATCAATCATTTGTTGTGGGCCAAGACTATTCAGTTGAGATGTTATTGGACCAGATAATGAGGAACCTTGGTTCAGAGGAGCAGCTAGCTCTGTACACAAAACTCGGGCAGATATTGCAAGAAAGGCGTTTATAA 1335 0.3955 MSCPVMLSVILVSLKDSKATSNNTTAILINNFSQFVLILLSFSTSSIQIPAEISKSNGNHLLVNDKYKYKSMWIRAYSSLWMLVSVSLIIYLGHLYIWAMVVVIQIFMASELFNLLRRATQDKRLPKFKLLNWHFFFTAMLFVYGRILSQQLVNTVTSDKFLYRFVSNLIKYQMVICYFLYIAGFVWFILSLKKRYYKYQFGQYAWTHMILIVVFTQSAFTVANIFSGIFWFIFPASLIAMNDVGAYFFGFFFGRTPLIKLSPKKTWEGFIGASVATMIAAFTFANFLGRFQWLTCPRKDLSTGWLQCDPDPIFKPEYIPLPGLISHWLPWKEIAVLPVQWHALWMGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFVYIYHQSFVVGQDYSVEMLLDQIMRNLGSEEQLALYTKLGQILQERRL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01845 444 Pfam Cytidylyltransferase family 74 404 - -
Pumo9g01845 444 PIRSF CDP-DAG_synth_e 18 444 IPR016720 GO:0004605
Pumo9g01845 444 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 50 442 IPR016720 GO:0004605
Pumo9g01845 444 ProSitePatterns Phosphatidate cytidylyltransferase signature. 362 388 IPR000374 GO:0016020|GO:0016772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01845 Pumo-Chr9 47602661 47607458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01845 51 442 Lipid Metabolism Gene Families AT4G26770 77.215 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01845 K00981 - gmx:100805363 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01845 9 47602661 47607458 Pumo9g01845 9 47602661 47607458 ECH