Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01844 ATGGCAGTGACCGAAGCTCAAAATCCTCTTCTTGGAGAAAACACATGTGGTTCCTTGTTAAAAAAGCTTCAGGAAATATGGGATGAGGTTGGTGAGAGCGACGAGCAACGAGACAAGATGCTTCTTCAGTTAGAGCAGGAGTGCTTGGATGTGTACAAGAGAAAGGTTGAGCAGGCTGCGAAGTCAAGGGCGCAGCTACTTCAAGCTCTGTCCGATGCTAAGCTTGAGCTTTCCAGTCTTCTATCAGCACTTGGAGAAAAGAGCTTTGCTGGAATTCCTGAGAACACTTCTGGAACTATCAAAGAACAGCTTGCAGCTATAGCACCAGTACTTGAACAGTTATGGCAACAAAAGGAAGAAAGAATTAAGGAGTTCTCAGATGTACAGTCACAGATCCAACAAATATGTGGAGAGATAGCTGGGAACTTGAACCTTAATGATGTTTCACCTGCAGTTGATGAGTCTGACCTGTCCCTGAAGAAGTTAGATGAATATCAATCTGAGCTCCAAGAACTTCAAAAGGAAAAGAGCGAGAGGTTGCACAAGGTTCTCGAATTTGTAAGTACTGTGCATGATCTATGTGCTGTCCTTGGTATGGACTTCTTCAGCACTGTAACCGAGGTTCATCCAAGCCTAAATGATTCTACTGGCGTTCAATCCAAGAGCATAAGTAATGACACCCTAGCTAGGCTGGCTAAGACTGTCCTAACGCTGAAAGAAGATAAAAAACAGAGGCTGCACAAGCTCCAAGAATTAGCTTCTCAGTTGATTGATCTTTGGAATCTAATGGATACTCATCCAGAGGAAAGGAGACTATTTGACCATGTTACCTGTAATATGTCAGCTTCTGTTGATGAAGTCACTGTTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGGCTGAAGTGGAAGTTGAGAGACTTGATCAGCTGAAAGCCAGCAGGATGAAGGAAATTGCTTTCAAGAAGCAAACAGAACTCGAAGAGATATTTGCCCGTGCTCATATAGAAATAGATCCAGATTCTGCCCGAGAGAAGATAATGGCATTGATCGATTCAGGAAACATTGAGCCAGCTGAATTACTGGCTGACATGGACAGTCAGATAGCAAAAGCAAAAGAAGAAGCTTTAAGCCGAAAAGATATATTGGACAAGGTTGAGAAATGGATGTCAGCATGTGAAGAAGAGAGTTGGCTTGAAGACTATAATCGGGATGAGAACAGGTATAATGCAAGCAGAGGTGCACACTTAAACCTCAAACGTGCAGAGAAAGCTCGGATATTGGTCAACAAAATTCCAGCTTTGGTCGATACATTGGTTGCTAAAACTCGTGCATGGGAAGAAGATCATGGCATGCCATTTACATATGATGGGGTTCCTCTTCTTGCCATGTTAGATGAATATGCCATGCTCAGACATGAACGGGAAGAGGAAAAACGGAGGATGAGGGATCAGAAAAAGCATCACGAGCAGCGAAACACGGAACAAGAAGCCATCTTTGGTTCAAGACCCAGCCCTGCTAGGCCAGTTAGTTCCAGTAAGGCAGGAGGTCCTCGTGCTAATGGAGGAGCCAATGGTACTCCTAACCGACGGCTATCGCTTAATGCTCATCAAAATGGAAACAGGTCAACATCAAAAGATGGAAAAAGGGATAACAGACTATCTGCTCCGGTGAATTATGTGGCCATATCGAAAGAAGATGCTGCTTCCCATGTTTCTGGTACTGAACCCATCCCGGCATCACCCTTATCTTCATTTTCAACCCTATAA 1770 0.4407 MAVTEAQNPLLGENTCGSLLKKLQEIWDEVGESDEQRDKMLLQLEQECLDVYKRKVEQAAKSRAQLLQALSDAKLELSSLLSALGEKSFAGIPENTSGTIKEQLAAIAPVLEQLWQQKEERIKEFSDVQSQIQQICGEIAGNLNLNDVSPAVDESDLSLKKLDEYQSELQELQKEKSERLHKVLEFVSTVHDLCAVLGMDFFSTVTEVHPSLNDSTGVQSKSISNDTLARLAKTVLTLKEDKKQRLHKLQELASQLIDLWNLMDTHPEERRLFDHVTCNMSASVDEVTVPGALALDLIEQAEVEVERLDQLKASRMKEIAFKKQTELEEIFARAHIEIDPDSAREKIMALIDSGNIEPAELLADMDSQIAKAKEEALSRKDILDKVEKWMSACEEESWLEDYNRDENRYNASRGAHLNLKRAEKARILVNKIPALVDTLVAKTRAWEEDHGMPFTYDGVPLLAMLDEYAMLRHEREEEKRRMRDQKKHHEQRNTEQEAIFGSRPSPARPVSSSKAGGPRANGGANGTPNRRLSLNAHQNGNRSTSKDGKRDNRLSAPVNYVAISKEDAASHVSGTEPIPASPLSSFSTL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01844 589 Coils Coil 461 492 - -
Pumo9g01844 589 Coils Coil 298 318 - -
Pumo9g01844 589 FunFam 65-kDa microtubule-associated protein 6 369 502 - -
Pumo9g01844 589 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 507 - -
Pumo9g01844 589 MobiDBLite consensus disorder prediction 526 542 - -
Pumo9g01844 589 MobiDBLite consensus disorder prediction 476 589 - -
Pumo9g01844 589 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 13 569 IPR007145 GO:0000226|GO:0008017
Pumo9g01844 589 Coils Coil 49 76 - -
Pumo9g01844 589 Gene3D - 368 502 - -
Pumo9g01844 589 MobiDBLite consensus disorder prediction 476 496 - -
Pumo9g01844 589 Coils Coil 155 182 - -
Pumo9g01844 589 Coils Coil 239 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01844 Pumo-Chr9 47584758 47588660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01844 13 540 EF-hand Containing Proteins AT5G62250 41.835 1.51e-123 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01844 K16732 - gmx:100806071 1067.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01844 9 47584758 47588660 Pumo9g01844 9 47584758 47588660 ECH