Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01843 ATGGCGAACGAGAACGAACCCGCGAAGCTGCTGTTACCTTACCTTCAACGCGCCGATGAATTGCAAAAGCACGAACCCCTCGTCGCTTATTACTGTCGATTATATGCGATGGAACGGGGGTTGAAGATTCCGCAAAGTGAGCGCACGAAGACCACTAATGCTCTTCTGGTTTCGCTCATGAAGCAGCTTGAAAAGGATAAAAAGTCAATCCAGTTGGGTCCGGAAGACAATTTATATCTCGAGGGATTTGCTTTGAATGTGTTCGGAAAAGCAGACAAGCAAGATCGTGCTGGAAGAGCAGATTTGAACACGGCAAAGACATTTTATGCTGCCAGCATCTTTTTTGAGATTCTTAATCAATTTGGAGCAGTTCAGCCTGATCTGGAGCAGAAACAGAAATATGCAGTGTGGAAAGCAGCTGATATAAGGAAAGCTTTGAAAGAAGGAAGGAAGCCCACAGCTGGCCCCCCTGCTGGTGATGAGGACCTGTCTGTTCCATTCAGTTCTTCAAGTGATAGATATGACCTTGGGACTACTGAAAATACTGTTTCCAGTCCTGGACCAGAATCTGATTCATCACATAGTTATCATAACCCTGTCAACTACCAGAATCTGCCAAGCATTCATCCTGCTCCTAAATTTCATGATAATGTTAACGACCAACATTCTGCAAATATTCCACCATCTATGTCATTTCATGATAGAGTAGATAATAACAAGCATTCTTCCGTTGTTTCTCCATCATCTCACTCTTTCACACCTGGAGTTTATCCTTCCCAAGACTACCATCCTCCTCCACCTTCCCAAGATTATCATTCTCCTCCACCTACCCAAGATTATCATTCTCCTCCACCTTCCCAAGACTATCATTCTCCTCCACCTTCCCAAGATTATCATCCTCCTCCACCATCCCAAGATTACCATCCTCCTCCACCTTCCCAAGATTACCATCCTCCACCTGCCAGATCAGAAAGTTCCTATCCTGAGCTCTACAACCATCAGCAATACTCACCAGAGAATTCACAGCATTTAGGTCCTAACTACCCTTCTCACGAAACTTCCTCTTATTCTTATCCCCATTTTCAGTCTTATCCAAGTTTTACAGAAAGCAGCCTTCCATCAGTCCCATCAAACTATACTTATTATCAAGGGTCAGATGCTTCATATTCTTCCCAGTCGGCTCCGCTAACTACAAACCATTCATCAAGTGCTCAACACAGTTCCAGCAGCAGAAATGGAACTGCGGTGGAACCTAAGTCAACTACTCAGACATACCAGTATGACAGTAACTACCAGCCAGCACCTGAAAAAATAGCAGAGGCACACAAGGCTGCAAGATTTGCCGTTGGGGCACTGGCATTTGATGATGTCTCAATTGCAGTAGACTTCTTGAAGAAATCACTTGAGTTGCTGACAAATCCATCAGCTGGCCAGTAG 1437 0.4454 MANENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNALLVSLMKQLEKDKKSIQLGPEDNLYLEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGAVQPDLEQKQKYAVWKAADIRKALKEGRKPTAGPPAGDEDLSVPFSSSSDRYDLGTTENTVSSPGPESDSSHSYHNPVNYQNLPSIHPAPKFHDNVNDQHSANIPPSMSFHDRVDNNKHSSVVSPSSHSFTPGVYPSQDYHPPPPSQDYHSPPPTQDYHSPPPSQDYHSPPPSQDYHPPPPSQDYHPPPPSQDYHPPPARSESSYPELYNHQQYSPENSQHLGPNYPSHETSSYSYPHFQSYPSFTESSLPSVPSNYTYYQGSDASYSSQSAPLTTNHSSSAQHSSSSRNGTAVEPKSTTQTYQYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSIAVDFLKKSLELLTNPSAGQ 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01843 478 Gene3D Immunoglobulin FC, subunit C 434 473 - -
Pumo9g01843 478 MobiDBLite consensus disorder prediction 164 205 - -
Pumo9g01843 478 Pfam Vta1 C-terminal domain 435 472 IPR041212 -
Pumo9g01843 478 Pfam Vta1 like 13 148 IPR039431 -
Pumo9g01843 478 MobiDBLite consensus disorder prediction 386 426 - -
Pumo9g01843 478 MobiDBLite consensus disorder prediction 148 356 - -
Pumo9g01843 478 MobiDBLite consensus disorder prediction 259 318 - -
Pumo9g01843 478 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 292 474 IPR044538 GO:0032511
Pumo9g01843 478 MobiDBLite consensus disorder prediction 241 256 - -
Pumo9g01843 478 Gene3D - 4 152 IPR023175 -
Pumo9g01843 478 MobiDBLite consensus disorder prediction 327 356 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01843 1 118 Glycosyltransferase AT2G31960 25.984 1.27e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01843 K12199 - gmx:100783739 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01843 9 47580020 47582953 Pumo9g01843 9 47580020 47582953 ECH