Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01840 ATGACACCCTCAATTTGTTTCCTTCTTCTATCCCTTCTGTTCCTTTCATCATCCACAAGTGGTGATCTCCAACACCATGAAGAGGGTTTCATCTCTGTGGTCATATCTGATAAGGGCCTTCATTTTGCCAAGGATATTCTGATAGACCAAGCTGTTGCCTCTATTGTTCTGTCTCAGCTGCCACAGATTGAGAAGACTGTGCAAGTCCCACTTGTTGGGAAAGCCAAAGTTGTTCTTTCTGACATCACTATCAATGATATCCAAGTTAATTCTTCATCTGTTAATACTGGAGAGACAGGCATTGCTCTTGTCGTTTCAGGTGCCACTGCTGACTTGAGTTTGAAGTGGAGGTACTCCGTTAGCAGTTGGTTAGTCCCCATTGGAATTTCGGACAGTGGAACCGCAACTGTAAAGGTTAATGATTTGCAAGTGGGACTTACTGTGAATTTAAGGAACCAAGAAGGAACTCTTAAGTTGATTCTCCTGGATTCTGGATGTCATGTTAGAGATTTATCAATAAAGTTGCACGGTGGAGCAGCTTGGCTTTACCAAGTGCTAGTAGATGCTTTTGCAGGAAATATAGCGTCTGCAGTTGAAGACGCAATTTCTAAGAAAATAAATGAGGGGATATCAACTCTTGACCTTTTATTGCAATCTCTTCCAAAGACAATCGCATTAGACGAAACTGCTGCTCTAAATGTTTCTTTCGTGGACAATCCCGTGCTGAGTGATTCTGCTATTGAATTAGAAATTAATGGTTTATTCACAGGGAGAAATGTAGTTTTGGTACCTCAAGGTTACCGCAGAGGATCAGACCTTTCTGTTTCCTGTGGTGACCGTTCACCAAAGATGATAACAATTTCACTACATGAAAATGTTTTCAAATCCGGTTCCTCAGTTTACTTCACTGCAGATAGTATGCAATGGATTGTTGATGAACTACCTGATCAGGCCCTTTTGAACACTGCTGAATGGAGATTCCTTATTCCTCAATTATACAAAAAATATCCAAATGATGACATGATTCTTAATATCTCTGTATTTTCTCCACCGGATGTACAAGTGACAAACAAAGATGTCGGTGTCAACATTTTCATAGATATAACAATTGCTGTTCTGGAAGATGGTGAAGTCATACCTGTTGCATGCATCTCGGTGGATTTTAGTGCCTCTTGTGCTGTGGAGATCGTAGGAAACAATCTTGCTGGTTGGCTTAAATTAAGAAAGTTTTCCACATACTTGAAATGGAGTAAAATAGGGAAACTGCACATGAATCTGATTCAGTCAGTGACATCAGCCGTCCTCAAAACCGTCCTCATACCATACCTGAACTCGCAGTTAATGAGGGGAATTCCACTGCCAATTCTTAATGGTTTTTCCATAGAGAATGCTCGTATATTGTATGCTCCCCCACGGATTACTGTGTGTAGTGATGTTTCTTTCTTAGGAGACTACTATCTCAAACAACTACCAGCCTATGTATCATAA 1488 0.4052 MTPSICFLLLSLLFLSSSTSGDLQHHEEGFISVVISDKGLHFAKDILIDQAVASIVLSQLPQIEKTVQVPLVGKAKVVLSDITINDIQVNSSSVNTGETGIALVVSGATADLSLKWRYSVSSWLVPIGISDSGTATVKVNDLQVGLTVNLRNQEGTLKLILLDSGCHVRDLSIKLHGGAAWLYQVLVDAFAGNIASAVEDAISKKINEGISTLDLLLQSLPKTIALDETAALNVSFVDNPVLSDSAIELEINGLFTGRNVVLVPQGYRRGSDLSVSCGDRSPKMITISLHENVFKSGSSVYFTADSMQWIVDELPDQALLNTAEWRFLIPQLYKKYPNDDMILNISVFSPPDVQVTNKDVGVNIFIDITIAVLEDGEVIPVACISVDFSASCAVEIVGNNLAGWLKLRKFSTYLKWSKIGKLHMNLIQSVTSAVLKTVLIPYLNSQLMRGIPLPILNGFSIENARILYAPPRITVCSDVSFLGDYYLKQLPAYVS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01840 495 PANTHER OS06G0309200 PROTEIN 6 491 IPR045897 -
Pumo9g01840 495 SMART bpi1_3 35 260 IPR017942 GO:0008289
Pumo9g01840 495 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 33 243 IPR017943 GO:0008289
Pumo9g01840 495 PIRSF Lipid_binding_protein 5 485 IPR030675 GO:0005615|GO:0008289
Pumo9g01840 495 Pfam LBP / BPI / CETP family, N-terminal domain 39 213 IPR017942 GO:0008289
Pumo9g01840 495 Pfam LBP / BPI / CETP family, C-terminal domain 280 468 IPR001124 GO:0008289
Pumo9g01840 495 Gene3D - 38 218 - -
Pumo9g01840 495 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 246 481 IPR017943 GO:0008289
Pumo9g01840 495 Gene3D - 32 466 - -
Pumo9g01840 495 SMART bpi2_2 279 484 IPR001124 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01840 Pumo-Chr9 47550140 47555404 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01840 K05399 - gmx:100804747 892.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01840 9 47550140 47555404 Pumo9g01840 9 47550140 47555404 ECH