Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01834 ATGAAGAGAGGTAGGTCATCATCTTCAGATGATGAAGCTGAGACTGAGGCTGAGGTTCAGTCACTCTCTGTGTCAGATTACCACCTTGTAGACGATGAGGACAATCCTGTATCTTTTGCTGTGTTGCCAATTCAATGGAGTGATTCTGAGAACTCTGAAGCCAACAAAGGTAAGGTGTTCCTGGACGGGGATGCCGATAATGGGCTGCGGAAGATTTTCATGCAAGTCACTGCATGGAGATTTGATCTTTCCAATGTCAGACCTGAGATATCCTTGCTATCAAAGGATGGAAGGTGGATCAAGCTTCAGAAGCCGAGGAAGAGCTTCCAGAAAGAAATAAGGACCGTTTTGATCACCCTTCACTTCCTCCATCATGCGAAGAAAAAACGTCAAATGTGTGCGGGATCAGTCTGGCAAGACTTGAGTAAGGATCAGGAGTTGAGCTCTTATGGGTTTAAGCCTTCACAAAAGGATTTATTGGACCATGTGCCTTTGATTGGTGAAGCTGCCAAAAGGGACGCAGTCTTAGCTAAATCCAAGCTTTTGCTCATGGTTTTGGAGAAACTGAAGAGTCAAAAACTTCTTGATAAGGAAGTTAATGATTTGGCTCAACCTGGACTTACAGTTGTTGGAATTGACAGTGATATGATAGATGAATCTAGTGAAGAGTCAGAAGAAAGGGATGATTTGGATGTTTGTGCACTTTGTGACAATGGTGGTAACGTTACGTGTTGTGATGGAGTGTGCATGAGGTCATTTCATGCTACTGTGGAGGCTGGTAGAGAAAATAGTTGTGTTTCTCTTGGTTTTACCCAGAAGGAAGTTGATGAGATCCAGAGCTTTTATTGTAAGAATTGTGAATATCATCAGCACCAATGCTTTGCATGTGGCAAGCTGGGGTCATCTGATAAAGTTAACGGTGCCGAGGTTTTTAAATGTGCTTCTGTGACCTGTGACCGTTTTTATCATCCACATTGTGTTGCAAAGTTACTTCCTCAGGTAGTTAAGCATGTTGCAGAGGAACTTGAGAGAAATATTGCTGTTGGGGATCCTTTTGCTTGTCCCCTTCATTATTGCTGTGTCTGTAAAGAATTGGAAAATAAGGTCAATCCTGAGTTGCAATTTGCTGTTTGTAGGCGTTGTCCAAAGTCATATCATCGCAAATGTTTGCCAAGAGAAATTGCTCTTGACAACAAGGATAACAAAAATATTATACAAAGGGCTTGGGAAGGTCTTTTACCAAATAACCGCATTCTGATATATTGCTTAAATCACAAGATTGATCGTGAACTTGGGACTCCTATAAGAGATCATATAAAATTCCCCAATATGAAAGCTACTGTTCAAAAAATTAATACTACTACTGAGCAGAAGAAACCTGCAAATAAAGAGAGGGTTATATTGAAGAAGAAAAATGTTGACTTAGATAATTCATCTGGCAAAAACATTGCTAAAGGATCTAAATTTACTGGAAAACTGTCTTCTGACAAAGTTGGTAGCAAGAAGTCTAATAAGGTGATTTCTGGTTCAAATATCTCAAGAAAGCCAAAATCAAAAGAAACATCAAGGTGTTTGACTGAAAATAAGAGGTCAATCTCAAAGAAATTTGAAATGCCCGACTCTGTGGAAAACTATAATGAGCCTACAATACGTGAGATATTATATGCTCTCAAGAAAGAGGGTTCAGAGCGAATCGAGCATGACAATCAGGTCAATAATGTGATTTCTAAGCCCCAGTCTGTCAAGCCTATTAGATCGCTGAGTGTTGAATTGCCTCCATTGGATGCTGATTCAGAAAAGAGTTTGTTGGCTTTGTTTAAAGAAGCTAGATCATCAATTACATTGGAGAGTGTCTTAGAAAAGCACACATTTGCTTCTACTCATACTCACTCGTTGAGAAATGTTGTGGAGAAGACCATTACAATGGGGAAGCTGGAAGACTCAGTTAATGCTGTTCGAACAGCTTTTAGAAAGTTAGAGAGTGGGTGCAGCATTCAGGATATAGAAGCTGTTTGTGACCCTGATGTTCTGAAGCAGTTATTTAAGTGGAAGATTGTTGATAAACTTCATTGGTATGTTCAGAACGGTGATATGATTGTGGACTTCTGCTGTGGTGCTAATGATTTTAGCATCCTTATGAAGAAAAAGCTTGAGGAGAAGGGGAAGAAATGCTCATATAGAAACTATGATTTACTTCCAACAAAGAATGATTTTAGTTTTGAAAGGAGGGATTGGATGACTGTCCAACCAACTGAGTTGCCGACAGGGTCACAGTTGATCATGGGGCTCAACCCACCCTTTGGGCATCAAGCAGCATTGGCTAACAAGTTTGTAGATAAGGCTCTTGAGTTTAAACCAAAGCTCCTAATTCTTATAGTACCACCAGAGACAGAGAGGCTTGATAAAAAACTATCACCGTATGATCTTATATGGGAGGATGAAAATTTTCTATCAGGCACTTCATTTTATCTACCTGGATCAGTTGATGTTAATTACAGACAAATGGACCAAAGGAATGGAAGGCCGCCTCTACTCTCCCTTTGGAGCCGTCCTGACTGGACTACTAAACACAAGGTCATAGCCCAAGAGCATGGTCATGTATGCAGCCAGCATGAAGTATTAGAGACTAAAAGCTTTAATACTGACAAGTTGGCTGCTTCTGATCATACTGTGAATGGAAATTATGCTGACAATTTAAAGTCAACTGATAATCAAGAAGATGAGAGTCAAGAGGGACAGGAATATAGGACAGGCAAGTCTGGCAAGTCACCGCGGAAGAGAAAACATGTCGAGGAAAATAATAAAACACAAGTAGGTGTGGTCTCACCAGCCAAAAGGCAGGCTATAAATGAAATGCTTGATGGAGTACCTGACAATCCAATCAATGGGAGATCCTCAGGTGAAGAAGGTCTTCAGCCCAAATCTGTTGAGGTTGGTGATGGTCTACCTGGTCATGGTCCTTCCCGGGGCCACTCAAGAAATAATATTGAGCAAGTAGTTTCAGTGACTTGA 3012 0.4064 MKRGRSSSSDDEAETEAEVQSLSVSDYHLVDDEDNPVSFAVLPIQWSDSENSEANKGKVFLDGDADNGLRKIFMQVTAWRFDLSNVRPEISLLSKDGRWIKLQKPRKSFQKEIRTVLITLHFLHHAKKKRQMCAGSVWQDLSKDQELSSYGFKPSQKDLLDHVPLIGEAAKRDAVLAKSKLLLMVLEKLKSQKLLDKEVNDLAQPGLTVVGIDSDMIDESSEESEERDDLDVCALCDNGGNVTCCDGVCMRSFHATVEAGRENSCVSLGFTQKEVDEIQSFYCKNCEYHQHQCFACGKLGSSDKVNGAEVFKCASVTCDRFYHPHCVAKLLPQVVKHVAEELERNIAVGDPFACPLHYCCVCKELENKVNPELQFAVCRRCPKSYHRKCLPREIALDNKDNKNIIQRAWEGLLPNNRILIYCLNHKIDRELGTPIRDHIKFPNMKATVQKINTTTEQKKPANKERVILKKKNVDLDNSSGKNIAKGSKFTGKLSSDKVGSKKSNKVISGSNISRKPKSKETSRCLTENKRSISKKFEMPDSVENYNEPTIREILYALKKEGSERIEHDNQVNNVISKPQSVKPIRSLSVELPPLDADSEKSLLALFKEARSSITLESVLEKHTFASTHTHSLRNVVEKTITMGKLEDSVNAVRTAFRKLESGCSIQDIEAVCDPDVLKQLFKWKIVDKLHWYVQNGDMIVDFCCGANDFSILMKKKLEEKGKKCSYRNYDLLPTKNDFSFERRDWMTVQPTELPTGSQLIMGLNPPFGHQAALANKFVDKALEFKPKLLILIVPPETERLDKKLSPYDLIWEDENFLSGTSFYLPGSVDVNYRQMDQRNGRPPLLSLWSRPDWTTKHKVIAQEHGHVCSQHEVLETKSFNTDKLAASDHTVNGNYADNLKSTDNQEDESQEGQEYRTGKSGKSPRKRKHVEENNKTQVGVVSPAKRQAINEMLDGVPDNPINGRSSGEEGLQPKSVEVGDGLPGHGPSRGHSRNNIEQVVSVT 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01834 1003 MobiDBLite consensus disorder prediction 901 934 - -
Pumo9g01834 1003 Pfam Cytosine specific DNA methyltransferase replication foci domain 23 115 IPR022702 -
Pumo9g01834 1003 MobiDBLite consensus disorder prediction 1 20 - -
Pumo9g01834 1003 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 289 IPR013083 -
Pumo9g01834 1003 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 16 880 - -
Pumo9g01834 1003 CDD PHD2_NSD 292 357 - -
Pumo9g01834 1003 CDD PHD_SF 358 402 - -
Pumo9g01834 1003 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 407 IPR013083 -
Pumo9g01834 1003 SMART PHD_3 232 287 IPR001965 -
Pumo9g01834 1003 SMART PHD_3 359 426 IPR001965 -
Pumo9g01834 1003 SMART PHD_3 292 358 IPR001965 -
Pumo9g01834 1003 MobiDBLite consensus disorder prediction 890 1003 - -
Pumo9g01834 1003 MobiDBLite consensus disorder prediction 477 526 - -
Pumo9g01834 1003 MobiDBLite consensus disorder prediction 477 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01834 Pumo-Chr9 47492676 47502267 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01834 - - gmx:100806429 1608.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01834 9 47492676 47502267 Pumo9g01834 9 47492676 47502267 ECH