Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01798 ATGCCAAAAATGGAGGGAAGGAGGACGAGGTTCCAATCGGAGTCACAACCACAGAGCGTGATTCTACTCACGAAAATCAAAGAATTCACTCGAGCGTTGCTTGCAGACCTCACCAACGGACGCTCACCGCTCATTCTCATCGATCGCTTCAGAAGCTACTGCACCCTTCCCAACTCCAACTGCTTTTGTGCCTCCGATTTGCCGTGCGGAAAGGAAGTTCTCACACTCCGCAGGAAATCCCACGCGCACAGACTAGTTGTAATGTTGAGAGTGATGCTGATAGTTCAGAAACTTTTGCAAGAGAACAGGCATAGTTCCAAGAGAGACATTTATTACACTTATCCTTCTGTATTTTTGGATCAGTCAGTAGTGGACCAAGCAATTAATGATATATGTATTCTTATGCAGTGCAGTCGCCATAACCTTAACGTGGTTTCTGCAGGGAACGGGTTAATTATGGGCTGGATAAGATTCTCTGAAGGAGAAAGGATATTTGACTGCATAAGTTCTCCCAACACTGCCCACCCTGTTCCTGTTCATGTTGAAGAAGTTCAAGATATCATTAGTGTTGCTCAATACATATTAGTTGTGGAGAAAGAATCAGTTTTCCAAAGACTAGCAAACGATCAATTCTGCAGTGCAAATCACTGTATTGTCATCACCGTAAGCAATCTTTTGAAGGCATTAGTTTCTTTTGCAACGATATTTCTTTGTTTGAATTCTATCTTTATACAGGGAAGAGGCTACCCAGATATTCCTACAAGAAGGTTTTTGCGGCTTCTGGTTGAGAATTTGCGCCTGCCTGCTTATTGCTTGGTAGATTGTGATCCCTATGGCTTTGACATCTTAACCACTTACAGATTTGGTTCAATGCAAATGGCTTATGACACGAAACATCTTCGTGTCCCAGAGATACACTGGCTTGGAGCTTTTACTTCTGATTCTGAGAGATATTTAGTTCCAAAGCAGTGTCTCCTTCCTTTGACTGCTGAAGACAAAAGAAAAGCTGAAGCCATGTTGCTTAGATGCTACCTTCAAAGGGAGGTACCACAATGGAGGTTGGAGCTACAGTCGATACTGCAAAAAGGAGTTAAGTTTGAGATTGAAGCCTTATCTGTGCACGCACTTTCATTCTTGTCAGAGTCTTACATACCATCTAAAATTGAAGGCTCCCTAAATGATTTCTTGCAGACTCGCATCCCACACAAGGCTAGTACTCGTGTCCCTTGTGTTTTGCAAATTGTAAATTACTTGTCGATTGGGGAATGGGCTTATTGGCATGTAAGGGTAGAAATGGGTCTGTCTACGATCTTTGGGGCAACATTTGTCTACCCAATTTAA 1341 0.4265 MPKMEGRRTRFQSESQPQSVILLTKIKEFTRALLADLTNGRSPLILIDRFRSYCTLPNSNCFCASDLPCGKEVLTLRRKSHAHRLVVMLRVMLIVQKLLQENRHSSKRDIYYTYPSVFLDQSVVDQAINDICILMQCSRHNLNVVSAGNGLIMGWIRFSEGERIFDCISSPNTAHPVPVHVEEVQDIISVAQYILVVEKESVFQRLANDQFCSANHCIVITVSNLLKALVSFATIFLCLNSIFIQGRGYPDIPTRRFLRLLVENLRLPAYCLVDCDPYGFDILTTYRFGSMQMAYDTKHLRVPEIHWLGAFTSDSERYLVPKQCLLPLTAEDKRKAEAMLLRCYLQREVPQWRLELQSILQKGVKFEIEALSVHALSFLSESYIPSKIEGSLNDFLQTRIPHKASTRVPCVLQIVNYLSIGEWAYWHVRVEMGLSTIFGATFVYPI 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01798 446 Gene3D - 149 392 - -
Pumo9g01798 446 SUPERFAMILY DNA topoisomerase IV, alpha subunit 82 222 IPR036078 GO:0003677|GO:0005694
Pumo9g01798 446 Gene3D - 10 147 IPR036388 -
Pumo9g01798 446 SUPERFAMILY DNA topoisomerase IV, alpha subunit 236 389 IPR036078 GO:0003677|GO:0005694
Pumo9g01798 446 PRINTS DNA topoisomerase VI subunit A family signature 139 154 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pumo9g01798 446 PRINTS DNA topoisomerase VI subunit A family signature 274 290 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pumo9g01798 446 PRINTS DNA topoisomerase VI subunit A family signature 121 138 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pumo9g01798 446 PRINTS DNA topoisomerase VI subunit A family signature 107 118 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pumo9g01798 446 Pfam Type IIB DNA topoisomerase 84 144 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Pumo9g01798 446 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 22 222 IPR002815 GO:0003677|GO:0003918|GO:0005694
Pumo9g01798 446 FunFam DNA topoisomerase 6 subunit A 148 393 - -
Pumo9g01798 446 CDD TOPRIM_TopoIIB_SPO 193 378 IPR034136 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01798 Pumo-Chr9 47115479 47119321 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01798 K10878 - gmx:100813920 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01798 9 47115479 47119321 Pumo9g01798 9 47115479 47119321 ECH