Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01795 ATGGCGCCTGTGGCAGCGAGAAGCACAGGCGCCATAGGTGTTGGTGCTGCCATCTTCATCTCACTCGCTCTCACCACTTATTTCATCTCCAAGACGAAGAAGAACAACAACAACAAATCAAGGAAGAAGGGACTCGTGAACGCCATAGGCAACACTCCTTTGATTCGGATCAACAGCCTCTCCGCCGCCACTGGTTGCGAAATTCTCGGCAAGTGCGAGTTCTTAAACCCCGGAGGCAGCGTCAAAGACCGTGTTGCTCTTCAAATCATTCAAGAGGCTCTGGAATCTGGCCAGCTACGTCCAGGTGGTATAGTCACTGAAGGGAGTGCTGGAAGCACCGCCGTTAGCATTGCCACTGTTGCTCCTGCCTTTGGATGCAAAACCCACGTGGTTATACCAGATGATGCTGCCATTGAGAAGTCTCAAATACTTGAAGCCCTTGGGGCAACTGTTGAAAGAGTGCGACCAGTGTCCATTACCCACAAAGACCATTTTGTCAATATTGCAAGAAGACGGGCATCTGAAGCAAACGAGTTTGCATTGAAGCGTAGAAATTCACAATTGAATGGCAAGGAGGACACTGAGAAAATAAATGGTTATGAATCTGATGGATGCAATTACAGCAGCTATCTGTTTCCTGAAGATTGTCAAGGTGGCTTTTTTGCTGATCAGTTTGAGAACCTGGCGAATTTCAGGGCCCATTATGAGGGTACAGGGCCTGAGATTTGGGAACAGACCAATGGAAAGTTAGATGCATTTGTTGCAGCAGCGGGCACTGGTGGTACTGTGGCTGGTGTTTCTAAGTTTCTTCAGGAAAAGAATCCAAACATCAAGTGCTTCCTCGTAGACCCTCCTGGCTCTGGTTTGTTTAATAAGGTAACTAGGGGAGTGATGTACACCAAAGAGGAGGCAGAAGGAAGAAGACTTAAGAATCCATTTGACACTATAACAGAAGGAATTGGAATTAACAGGATAACAAAGAATTTCGCAATGGCAAAACTTGATGGGGCCTTTAGAGGCACTGATGGGGAGGCTGTTGAAATGTCTAGGTTTCTTTTGAAGAACGATGGGCTCTTCCTTGGGAGTTCTTCTGCAATGAACTGTGTTGGAGCACTTAGAGTAGCGCAGGCAATTGGCCCTGGTCACACAATTGTAACCATTCTCTGTGACAGTGGAATGAGACATTTGAGCAAATTCTATGATGCTGAATACTTGTCTCAGCTTGGTTTGACACCGAAAGCAACTGGTTTGGAGTTCTTAGGCATCAAATGA 1272 0.4646 MAPVAARSTGAIGVGAAIFISLALTTYFISKTKKNNNNKSRKKGLVNAIGNTPLIRINSLSAATGCEILGKCEFLNPGGSVKDRVALQIIQEALESGQLRPGGIVTEGSAGSTAVSIATVAPAFGCKTHVVIPDDAAIEKSQILEALGATVERVRPVSITHKDHFVNIARRRASEANEFALKRRNSQLNGKEDTEKINGYESDGCNYSSYLFPEDCQGGFFADQFENLANFRAHYEGTGPEIWEQTNGKLDAFVAAAGTGGTVAGVSKFLQEKNPNIKCFLVDPPGSGLFNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRITKNFAMAKLDGAFRGTDGEAVEMSRFLLKNDGLFLGSSSAMNCVGALRVAQAIGPGHTIVTILCDSGMRHLSKFYDAEYLSQLGLTPKATGLEFLGIK 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01795 423 FunFam Cysteine synthase 232 396 - -
Pumo9g01795 423 FunFam Cysteine synthase, putative 49 78 - -
Pumo9g01795 423 Pfam Pyridoxal-phosphate dependent enzyme 48 390 IPR001926 -
Pumo9g01795 423 Gene3D - 76 193 IPR036052 -
Pumo9g01795 423 PANTHER CYSTATHIONINE BETA-SYNTHASE 43 404 - -
Pumo9g01795 423 Gene3D - 48 75 IPR036052 -
Pumo9g01795 423 Gene3D - 212 405 IPR036052 -
Pumo9g01795 423 CDD CBS_like 50 397 - -
Pumo9g01795 423 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 71 89 IPR001216 GO:0006535
Pumo9g01795 423 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 44 404 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01795 Pumo-Chr9 47100150 47102700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01795 40 397 Miscellaneous Gene Families AT3G04940 28.611 7.31e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01795 K01738 - gmx:100799081 763.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01795 9 47100150 47102700 Pumo9g01795 9 47100150 47102700 ECH