Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01784 ATGGGAGAGGAAGGTGTGAGAGAAGAGAAGTCCCATGTTGGTTTGTTTGAGACAAAAGAAGCAAGATTCCGAGGAGTTTACAAGGTGTTTGCATCTACAATATTTGCTGCTATCTGTTTGATTTGGGTGTACAGAGTGGCAAACATCTCCACAGTTAAAAGTGGGAGATGGGCTTGGATTAGTGTTATGGTCTCAGAGTTGGCTTTTGGGTTATACTGGGTCATCACTCAATCTGTTCGTTGGAGAATCGTCTATCAAACGCCTTTCAAACACAGGCTCTCGCAAAGATATGTGAAGGAAAATTTACCAGCAGTGGACATATTTGTGTGCACGGCTGACCCAAAACTGGAGCCTCCATGCATGACGATTAACACGGTATTATCAGCAATGGCGTACAATTATCCTTCGAATAAATTGAGTGTATATCTCTCTGACGATGGAGGGTCAGAGCTGACATTCTATTCTCTCTTAAAGGCCTCAATTTTCTCCAAACATTGGTTACCTTTCTGTAGAAGATTCAATGTTGAACCTAGGTCACCAGAGGCATTCTTCGCTGCCCAAAATTGTAGCACTAATAGCACTCAGTATGGCCAAGCATGGTTATTTATCAAGAAATTATACGAAGACATGAAAAATGAGATTGAATCAGCTGTAGCAAAGGGCAGGGTTCCAGATAATGTGAGGAAACAGCACAAAGGATTCTCAGAATGGAATCCAAAAACAACAAAGCAGGATCACCAACCTATCGTGCAGATAATAATTGATGGAAGGGACACAAATGCTGTAGACGAAGACGGAATTCAACTGCCAACAGTCGTATACATGGCACGCGAGAAACGACCCAACTACCCTCACCACTTCAAAGCAGGAGCTGTTAATGCACTCATAAGAGTGTCATCTGAGATAAGCAACGCCCCTTTCATCCTCAACTTAGATTGTGATATGTACTCCAATAATGCAGATACAATTCAAGAAATACTATGTTTCTTCTTGGATGAAACAAAAGGCCATGATATAGCTTATGTGCAATTTCCACAGAGCTATAATAACATCACCAAGAATGACCACTACGCAAATTCTTATCTTGTGAGCAGTAAGTTTGAGTTAGCTGGCATATGTGGATATGGAGCAGCCTTGTTTTGTGGAACTGGGTGTTTACATCGAAGAGAAAGTCTTTCAGGAGCTTACATGAAAGACTACAAAGCAAAATGGGACATCAAGCCTAAAAGAAACGATAACAGAACAATTGATGAATTGAATGAAGCATCGAAGGCTCTTGCCACTTGCACCTATGAGGAGGGCACTCAATGGGGGAAGGAAATGGGATTAGTATATGGTATTCCCGTGGAAGACATTGCTACTGGCCTTGTAATCTCATGCAGAGGTTGGAAATCGATTTATTACAACCCGGAAAGGAAGGCTTTTGTGGGTATAGCTCCAACAACCTTGGATGTAGCCAGTCTTCAGCATATGAGGTGGTCAGAAGGCATGTTCCAAGTTTTCTTCTCCAAGTATTGCCCTTTCATTTATGGGCATGGGAAGATACACTTAGGTGTACAAATGGGATATTGCAATTACCTCTTTTGGGCTCCTATGTCTCTGCCTACTCTCTGTTATGTCATTGTTCTTCCCATTTGCTTGCTTCATGGCATTCCATTATTCCCACAGCTTTCAAGCATATGGGTCCTTCCATTTGCATATGCATTTCTTGCTACGTATGGCTTTAGCTTGTGTGAGTATTTGATTTGTGGGTCCACAGCAAAGGGTTGGTGGAATCTGCAAAGGATTAAGTTCATCCATAGGACTACCTCGTATCTCTTTGGTTTCATTGACACCATGACCAAGCAATTAGGGTTGTCACAAACAAACTTTGTCGTCACGGATAAAGTGGTTACTGAGGATGTCCAAAAGAGGTATGAGCAAGAGATCATTGAATTTGGAGGCTCTTCAATCTTGTTAACCATATTAGCAACGGTGGCATTGCTAAACCTTTTTGGTCTCGTTGGGGGAATCAAGAGGATTTTGATGGATATGGAATTCAGCTCTAACCAATTGATGATGCAGATTGCACTGAGTTCATTGGTCGTAATGATCAATTTACCAGTGTATGAGGCACTTTTCATTCGTAGTGATAAAGGTTGCATATCATCTTCAGTTATGCTCAAGTCCATTGTCTTGGCTTCATTAGCCTGTTGCCTAGCACCTTTCATTTGCTAA 2217 0.4168 MGEEGVREEKSHVGLFETKEARFRGVYKVFASTIFAAICLIWVYRVANISTVKSGRWAWISVMVSELAFGLYWVITQSVRWRIVYQTPFKHRLSQRYVKENLPAVDIFVCTADPKLEPPCMTINTVLSAMAYNYPSNKLSVYLSDDGGSELTFYSLLKASIFSKHWLPFCRRFNVEPRSPEAFFAAQNCSTNSTQYGQAWLFIKKLYEDMKNEIESAVAKGRVPDNVRKQHKGFSEWNPKTTKQDHQPIVQIIIDGRDTNAVDEDGIQLPTVVYMAREKRPNYPHHFKAGAVNALIRVSSEISNAPFILNLDCDMYSNNADTIQEILCFFLDETKGHDIAYVQFPQSYNNITKNDHYANSYLVSSKFELAGICGYGAALFCGTGCLHRRESLSGAYMKDYKAKWDIKPKRNDNRTIDELNEASKALATCTYEEGTQWGKEMGLVYGIPVEDIATGLVISCRGWKSIYYNPERKAFVGIAPTTLDVASLQHMRWSEGMFQVFFSKYCPFIYGHGKIHLGVQMGYCNYLFWAPMSLPTLCYVIVLPICLLHGIPLFPQLSSIWVLPFAYAFLATYGFSLCEYLICGSTAKGWWNLQRIKFIHRTTSYLFGFIDTMTKQLGLSQTNFVVTDKVVTEDVQKRYEQEIIEFGGSSILLTILATVALLNLFGLVGGIKRILMDMEFSSNQLMMQIALSSLVVMINLPVYEALFIRSDKGCISSSVMLKSIVLASLACCLAPFIC 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01784 738 FunFam Cellulose synthase isolog 94 192 - -
Pumo9g01784 738 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 94 194 IPR029044 -
Pumo9g01784 738 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 240 401 IPR029044 -
Pumo9g01784 738 SUPERFAMILY Nucleotide-diphospho-sugar transferases 123 505 IPR029044 -
Pumo9g01784 738 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 22 725 - -
Pumo9g01784 738 Pfam Cellulose synthase 105 395 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pumo9g01784 738 Pfam Cellulose synthase 418 730 IPR005150 GO:0016020|GO:0016760|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01784 Pumo-Chr9 47009332 47020795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01784 15 734 Glycosyltransferase AT1G55850 47.521 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01784 - - gmx:100779861 1380.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01784 9 47009332 47020795 Pumo9g01784 9 47009332 47020795 ECH
Pumo1g00764 1 11435241 11436380 Pumo9g01784 9 47009332 47020795 PCT