Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01780 ATGGTTGCCAAAATCAGGCAAAGTGTTGCTAACTCTCCAAATCCAACAAAACCAGTGGTTGGAGAGATTGACACCAGTCCACCTTTTCAATCTGTTAAGGATGCTGTTTCTCTATTTGGTGAAGGTGCTTCCTCTGGTGAAACACCTCCCATTAAGAAGGCAAAATCTTATTTTGCTGAGAGTGTTTGGGCAAAGGAGAGACAACTTCACCTAGCCCAGAAAGAGCTGAAAAAATTAAAGGAACAACTAAAGAATGCAGAAACTACCGAGGCTCAAGTCCTGGTGGAGCTTGAAAAGGCTAAAAGAGTGGTTGAGGATCTCTCGCAAAAGCTTAAAGTTCTCAGTGAATCCAGAGAATCAGCAATTCAGGCAACAGAAGCTTCAAAAAGTCAAGCAAAACAGCTTAAAGAAGAAAAATGTAGTGATCCTGATGGAACCAATGGTGTTTGGAAAGAAGAGTTAGAAACTGCCGTTAAAAATTATGCATCTGTCATTACAGAACTTGATGTTGCAAAGCAAGAACTGAGCAAAATTCGTCAGGGGTATGATTTATCCTTGGAAGCAAGAGTTTCTGCTCTCAAGCAAGCAGCAGAAGCTGAAAATGCAATGAAGGCGAACACAGAAAGAGCATCTGAGCTATCTAAAGAAATTTTGGCTGTACAGGAATCAATTGAGCAAATGAATGCTGACTCGGTCCAAGCACATCAACTGCAAGAAGAGACATTAGCCGAGCAAAACATTCTAAGACAATCATATGAAGCCACCCTTGAAGAATCAAAAAAGAAGTTGCTTGATTTAAAGAAGGAATTTAATCCAGAGCTTACCAAAAATCTTGAAGTGCAGCTGACTGAGACAATGAGTGAAATTGGGGTTCTGCAAAAGCAAATTGAAAATAAAAAGACATCAGACTTGGACTCTTTGAGCAGTGTCACTCTGGAGCTTGATGATGCTAAGGAATCACTGCAAAAAGTAGCAGGACAGGAAGACTCCCTTAGAAGCATGGTGGAAGCTCTTAGGATTGAGCTGGAGAATGTAAAAAGAGAACACTCTGAATTGAAGGAGAAAGAATCCAAAACTGAATCCATTGTTGAGAATCTGCGGATAGAGCTCCAGAAAAGTGAGTTTGAACTTGAAGCCTACTTGGCAGAAGAATCTAAAGCTAGAGGTGCATCAGAGGAAATGATCTTGAAATTGAGTCAGTTGTTGTCTGAAACTGAAAATGCAAGGAGGGAAACAGAAGATATGAAGAATGAGGCAGCAGAATTGAAGATGGAAGCTGCAGTCACTAAACTTGTGTTGGAAGATGTAGAAATAAAGCTTAAAGTAGCATTGGAAGAAGTGGAAACAGCTAAAGCAGCTGAGGCAAGTGCTCTTGATCAGATTAAGGTCTTATCTATGAGGACTAGTGCTTCTCATTCATCAACTTCTGAACCTGGTGCAAGAATTGCAATCTCAAGGGAGGAGTTTGAATCCTTAGTTCATAAGGTTGAGGAGTCTGATAAATTAGCAGATATGAAAGTGGCTGCTGCCACAGCACAGGTTGAAGCTGCAAAGGCTAGTGAAAATGAAGTTCTAAAAGGGTTAGAGGAAACTCAGAAGGAAATTGAGGATATGAAGACTGAAACACAGGCAGCCTTGAAAAGGGCTGACATGGCTGAAGCAGCAAAGAGGGCAGTGGAGGGTGAGCTCAGAAAGTGGCGAGAACGAGAGCAGAAGAAAGCAGCAGAAGCTGCATCTAGAATATTGGCTGAAACACAAATTTCCCCAGAACTATCTCCTCAGCACTATAGGATTCAAACGCAGAATTCACCTCCAAACAAGGTGGAGATGAGGAAGTTAGAAAAGGGGAAGGTGTCAGTTTCAAAGAAAGTTCTCTTGCCTAATATCAGTGGCATCTTTCACAGGAAAAAGAATCAGGTTGAGGGAGGATCTTCTTCTTAG 1941 0.4142 MVAKIRQSVANSPNPTKPVVGEIDTSPPFQSVKDAVSLFGEGASSGETPPIKKAKSYFAESVWAKERQLHLAQKELKKLKEQLKNAETTEAQVLVELEKAKRVVEDLSQKLKVLSESRESAIQATEASKSQAKQLKEEKCSDPDGTNGVWKEELETAVKNYASVITELDVAKQELSKIRQGYDLSLEARVSALKQAAEAENAMKANTERASELSKEILAVQESIEQMNADSVQAHQLQEETLAEQNILRQSYEATLEESKKKLLDLKKEFNPELTKNLEVQLTETMSEIGVLQKQIENKKTSDLDSLSSVTLELDDAKESLQKVAGQEDSLRSMVEALRIELENVKREHSELKEKESKTESIVENLRIELQKSEFELEAYLAEESKARGASEEMILKLSQLLSETENARRETEDMKNEAAELKMEAAVTKLVLEDVEIKLKVALEEVETAKAAEASALDQIKVLSMRTSASHSSTSEPGARIAISREEFESLVHKVEESDKLADMKVAAATAQVEAAKASENEVLKGLEETQKEIEDMKTETQAALKRADMAEAAKRAVEGELRKWREREQKKAAEAASRILAETQISPELSPQHYRIQTQNSPPNKVEMRKLEKGKVSVSKKVLLPNISGIFHRKKNQVEGGSSS 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01780 646 MobiDBLite consensus disorder prediction 584 615 - -
Pumo9g01780 646 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 21 621 - -
Pumo9g01780 646 MobiDBLite consensus disorder prediction 131 148 - -
Pumo9g01780 646 Coils Coil 398 425 - -
Pumo9g01780 646 MobiDBLite consensus disorder prediction 585 607 - -
Pumo9g01780 646 Coils Coil 242 269 - -
Pumo9g01780 646 Coils Coil 328 383 - -
Pumo9g01780 646 MobiDBLite consensus disorder prediction 117 148 - -
Pumo9g01780 646 Pfam Weak chloroplast movement under blue light 22 235 IPR008545 -
Pumo9g01780 646 Pfam Weak chloroplast movement under blue light 241 572 IPR008545 -
Pumo9g01780 646 Coils Coil 433 453 - -
Pumo9g01780 646 MobiDBLite consensus disorder prediction 1 26 - -
Pumo9g01780 646 Coils Coil 62 138 - -
Pumo9g01780 646 Coils Coil 196 230 - -
Pumo9g01780 646 Coils Coil 521 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01780 Pumo-Chr9 46943091 46946389 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01780 - - gmx:100817643 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01780 9 46943091 46946389 Pumo9g01780 9 46943091 46946389 ECH
Pumo1g00762 1 11405297 11410448 Pumo9g01780 9 46943091 46946389 PCT