Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01779 ATGCCGAAAGGTTCGGGCATAGGACCGTCGGTTGGCACCATCAAGAAAATAAAAGAATCCCAGAATGACACGTGTCACGTAAATGAATGGATGACCCGATTCCACCGACAAATCCTAGAGCCAACCCCACAGGAACTCACCCTCGTCCAACATCATCAAGCACCTCGAAATAGAGAGAGGCACCCACACTCACTCACTCACACACACACACACAACGCTGTTAGAGCAGAAAAGAGAGATTGGTTGTGGTCTGCTGCTATGGCGAGTAACAGAGAGAGAGAAGAGTCGCTGACATTCACAATCCCTTCTTCCTCTTCCCATTCTTCCCCCATCACCGTCTCCGACCAACTCGACAGTTACCTCGCCGACCCCAGAAGCGCCTCCGGAAGCTTCCAGAACGACGGCCTTCTCTCCGCCGATCCTGACTTCGGATTCGCCCGCCCCGATTTCCGGCAGAGCCCCCTCGCCGGCACCGTCGAGTTCTACCAACGCCACGTCTTCCTCTGCTACAAGAACCCTCGCGTCTGGCCACCGCGCATAGAAGCCGCCGAGTTCGATCGCTTGCCAAGGTTGCTCCACGCCGCCGTTGTCGCAAGGAAGACTCACATGAAAAAGGAGACTCGGTTAACGATATGTGAGGGTCATGATGGGACTGAGACATCTAATGGGGATGTGTTGATCTTTCCTGACATGGTTAGATACAGGAGATTAACGCATTTTGATGTTGAAACGTTTGTTGAAGAGGTTCTTGTGAAGGATGGGGAATGGCTTCCGGGAACCCCTGAGGCGTTGAGAGGTTCGTATGTTTTTGTGTGTTCACATGGATCCCGTGATCGCAGATGTGGTGTTTGTGGACCTGTCTTGGTCAGTAGATTCAGGGAGGAGATAGAATTGCATGGTCTTCAAGGTAAAGTGTTTGTAAGCCCGTGTTCGCACATTGGGGCAAGTCAGTATGCAGGAAACGTCATTGTATTTGGACCTAGCATGAATGGAGAAGTCACTGGCCACTGGTATGGATATGTTACCCCAGATGATGTACCTTCATTGCTTCAACATCATATCATAAAAGGGGAGATTTTAGATTCATTATGGAGGGGTCAGATGGGTTTATCAATAGAAGAACAGAAGAAAAAGCAAGAACAGAGGCTTCTGCTGAATGACTTAAGAAATTTAGAAGACAGCACTCAAGTGTGTAGATCTCAAGACAATTTCGTGAGCTGCTGCCAATCAAATGGAGTTGGCTGCTGCCAATCAAATGGAGACTCTTTCCATCAGAATCACGTGTTATTGGAAACAAGAATGGACCCTGATGTCATTGAGACAGAGGCAAAGCTCTCAGCTGATAATAAGAGCAGTGAGACTGTGCTTTCTCGGATCAATAGTGGCAAAGGAGCTTCACGCAAGTTTCCTTCCATGACAACTTGGCTTGATGGCTGGGAGCAAGAAGATACTTATGCAGCTCTTGCTGTTGTCTGTGCTGCTGTGTCAGTTGCCATTGCCTATAACTGCTACAAACTGAGATGA 1524 0.4882 MPKGSGIGPSVGTIKKIKESQNDTCHVNEWMTRFHRQILEPTPQELTLVQHHQAPRNRERHPHSLTHTHTHNAVRAEKRDWLWSAAMASNREREESLTFTIPSSSSHSSPITVSDQLDSYLADPRSASGSFQNDGLLSADPDFGFARPDFRQSPLAGTVEFYQRHVFLCYKNPRVWPPRIEAAEFDRLPRLLHAAVVARKTHMKKETRLTICEGHDGTETSNGDVLIFPDMVRYRRLTHFDVETFVEEVLVKDGEWLPGTPEALRGSYVFVCSHGSRDRRCGVCGPVLVSRFREEIELHGLQGKVFVSPCSHIGASQYAGNVIVFGPSMNGEVTGHWYGYVTPDDVPSLLQHHIIKGEILDSLWRGQMGLSIEEQKKKQEQRLLLNDLRNLEDSTQVCRSQDNFVSCCQSNGVGCCQSNGDSFHQNHVLLETRMDPDVIETEAKLSADNKSSETVLSRINSGKGASRKFPSMTTWLDGWEQEDTYAALAVVCAAVSVAIAYNCYKLR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01779 507 CDD TRX_Fd_Sucrase 266 368 IPR009737 -
Pumo9g01779 507 PANTHER ACTIN PATCHES DISTAL PROTEIN 1 114 495 IPR009737 -
Pumo9g01779 507 Gene3D Glutaredoxin 266 366 - -
Pumo9g01779 507 Pfam Sucrase/ferredoxin-like 155 366 IPR009737 -
Pumo9g01779 507 FunFam APD1p protein 266 365 - -
Pumo9g01779 507 SUPERFAMILY Thioredoxin-like 268 371 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01779 Pumo-Chr9 46938801 46942164 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01779 - - gmx:100816329 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01779 9 46938801 46942164 Pumo9g01779 9 46938801 46942164 ECH
Pumo1g00761 1 11396047 11400456 Pumo9g01779 9 46938801 46942164 PCT