Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01684 ATGGAAGTTGAAAGGATTGAATTGCTTAGTGGAGTTGATGATCATCATGGAGGAGTCCTTGTAAACGTCGACAACCCTATGGATTCTACGCTCTTCTCCTCTATATTGGAAGCTTCAATCTACAATTGGACTCAACAGGGAAAGAAGGGGGTCTGGATCAAGTTGCCCATACAACATTCAAATCTTGTTGATCCTGCAGTGAAGGCTGGATTTAGGTACCACCATGCTGAGCCAGATTACGTGATGCTTGTACGTTGGATTCCAGATACTCCTGATACCCTTCCTGCAAATGCTTCACATCGCGTCGGTGTTGGTGCTTTTGTCCTCAACAACAACAACCAGGTGCTTGTGGTTCAAGAAACAGGTGGCAAATTCAAAGGCACAGGTGTATGGAAGATGCCTACAGGAGCTGTTAATGAAGGTGAGGATCTCTGTGAAGCTGCAATTAGAGAAGTCAAAGAAGAGACAGGGATAGAGACAAAGTTTGTTGAAGTTTTAGCATTCAGGCAAAGCCATAAGTCGTTCTTCGAGAAATCAGATTTGTTCTTTGTTTGCATGTTGCAACCTCAATCGTTTGACATTCAGAGTCAGGCTTCAGAGATTGAGGCAGCGAAGTGGATGCCAGTTGAAGATTATGCTGCCCAGCCTTTTGTGCAAGAAAATGAGCTCTTTGACTTTATTACAAAAATATGCTTTTCAAAGTTGAAGGGCAACTACACCGGTTTTTCTAACTTACTTACTTGTACATCTTCTGGCAAAAACACCTATCTGTATTTTAACAACCGGGATGCCAGCCTTTTGTCAGCTTCCAAACAGGAGCAAGCTTGA 828 0.43 MEVERIELLSGVDDHHGGVLVNVDNPMDSTLFSSILEASIYNWTQQGKKGVWIKLPIQHSNLVDPAVKAGFRYHHAEPDYVMLVRWIPDTPDTLPANASHRVGVGAFVLNNNNQVLVVQETGGKFKGTGVWKMPTGAVNEGEDLCEAAIREVKEETGIETKFVEVLAFRQSHKSFFEKSDLFFVCMLQPQSFDIQSQASEIEAAKWMPVEDYAAQPFVQENELFDFITKICFSKLKGNYTGFSNLLTCTSSGKNTYLYFNNRDASLLSASKQEQA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01684 275 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 185 209 IPR003293 -
Pumo9g01684 275 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 97 115 IPR003293 -
Pumo9g01684 275 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 59 77 IPR003293 -
Pumo9g01684 275 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 81 97 IPR003293 -
Pumo9g01684 275 ProSiteProfiles Nudix hydrolase domain profile. 99 231 IPR000086 -
Pumo9g01684 275 Pfam NUDIX domain 100 220 IPR000086 -
Pumo9g01684 275 PANTHER NUDIX HYDROLASE RELATED 3 264 IPR003293 -
Pumo9g01684 275 FunFam nudix hydrolase 2 6 92 - -
Pumo9g01684 275 SUPERFAMILY Nudix 68 222 IPR015797 -
Pumo9g01684 275 Gene3D - 6 92 - -
Pumo9g01684 275 PRINTS NUDIX hydrolase family signature 131 145 IPR020476 -
Pumo9g01684 275 PRINTS NUDIX hydrolase family signature 145 160 IPR020476 -
Pumo9g01684 275 FunFam Nudix hydrolase 8 101 239 - -
Pumo9g01684 275 ProSitePatterns Nudix box signature. 136 157 IPR020084 GO:0016787
Pumo9g01684 275 Pfam Nudix hydrolase domain 9 87 IPR040618 -
Pumo9g01684 275 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 101 235 - -
Pumo9g01684 275 CDD Nudix_Hydrolase_12 100 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01684 Pumo-Chr9 45947763 45951201 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01684 K26956 - gmx:100818821 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01684 9 45947763 45951201 Pumo9g01684 9 45947763 45951201 ECH