Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01683 ATGAAGAACCTCATCTTTCTTTTCGTCTTCCTCTTCCTAGCCTCCTCCGCCGCCGCTAGCGTCCCCGCCCACAACATCACGCACATGCTGGCCAAACACCCAGGCTTCTCCACCTTCAACCACTACCTCTCCGTCACCCACCTGGCCGAAGAGATCAACCGCCGCCAGACCATCACCGTCCTCGCCCTCGACAATGCCGCCATGTCCTCCCTCCTCGACAAGCACCTCTCCCTCCCCACCATCAAAAACGTCCTCTCCCTCCACGTCCTCGTCGACTACTTCGGCGCCAAAAAGCTCCACCAGATCAACAACAGCACCACCCTCGTCTCCTCCATGTTCCAGGCCACCGGCTCAGCCTCCGGCACCGCCGGCTACGTCAACATCACCAACCTCAAGGGCGGCAAGGTCGGTTTCGCCGCCGAGGACAACGACGGCTCCCTCCACTCCTTCTACGTGAAATCCGTCCAGGAAATGCCCTACTACATCTCCGTCCTCCAAATCAGCGCCGTCATTAGCTCCGCCGACGCCGAAGCCCCCACCGCCGCCCCCTCCGCCATCGACCTCATCTCCATTATGTCCAAACAAGGCTGCAAGGCGTTCGCAGACCTTCTAAGAGGCTCCAAGGCGCTTCCAACTTTCAAGGAAAACGTTGACGGCGGCTTAACAGTCTTCTGCCCGACCGACAGCGCCGTTAGCGGGTTCGCGCCAAAGTACAAGAACCTGACGGAGGCTCAGAAAGTTTCCCTTCTGTTATATCACGCCACTCCCGTTTACGAGTCCCTGCAGATGCTGAAATCCAGCAACGGCATCATGAACACTCTCGCCACCGAGGGAGCCAACAAGTACGACTTCACCGTCAAGAGTGAAGGCGAAGACGTCAGTCTCAAGACTAAAATCAACACCGCCACCATTGTAGGCACCTTGATAGATCAAGACCCCTTCGTCGCTTATAAGATTAACAAGGTCTTGATGCCAAGAGAGTTGTTCAAGGCCAGCGACGCCGAAGACCAAGCACCTGCCGAGTCCCCTAAGCCTGCCAAGAAGAAGAAGACTAAGAAGGGAGAGCAAGATTCCAACGCCGCGGATGCACCGGCGGACGGACCATCGGGCGATTCGGAAGATCAGAAGGCTGCTGATGAAGACAGCAATGGAGTAAGTGGATTGCACGTGAGATTCGTCATGGTATTCTTCAGTTTCATTATCGGCTTTTTAGTTCTATGA 1221 0.561 MKNLIFLFVFLFLASSAAASVPAHNITHMLAKHPGFSTFNHYLSVTHLAEEINRRQTITVLALDNAAMSSLLDKHLSLPTIKNVLSLHVLVDYFGAKKLHQINNSTTLVSSMFQATGSASGTAGYVNITNLKGGKVGFAAEDNDGSLHSFYVKSVQEMPYYISVLQISAVISSADAEAPTAAPSAIDLISIMSKQGCKAFADLLRGSKALPTFKENVDGGLTVFCPTDSAVSGFAPKYKNLTEAQKVSLLLYHATPVYESLQMLKSSNGIMNTLATEGANKYDFTVKSEGEDVSLKTKINTATIVGTLIDQDPFVAYKINKVLMPRELFKASDAEDQAPAESPKPAKKKKTKKGEQDSNAADAPADGPSGDSEDQKAADEDSNGVSGLHVRFVMVFFSFIIGFLVL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01683 406 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 390 IPR033254 -
Pumo9g01683 406 ProSiteProfiles FAS1/BIgH3 domain profile. 184 323 IPR000782 -
Pumo9g01683 406 MobiDBLite consensus disorder prediction 340 359 - -
Pumo9g01683 406 SMART fasc_3 222 326 IPR000782 -
Pumo9g01683 406 MobiDBLite consensus disorder prediction 333 382 - -
Pumo9g01683 406 SUPERFAMILY FAS1 domain 30 170 IPR036378 -
Pumo9g01683 406 Gene3D FAS1 domain 23 155 IPR036378 -
Pumo9g01683 406 Pfam Fasciclin domain 197 325 IPR000782 -
Pumo9g01683 406 Pfam Fasciclin domain 35 109 IPR000782 -
Pumo9g01683 406 SUPERFAMILY FAS1 domain 182 326 IPR036378 -
Pumo9g01683 406 ProSiteProfiles FAS1/BIgH3 domain profile. 23 190 IPR000782 -
Pumo9g01683 406 FunFam Fasciclin-like arabinogalactan protein 10 177 326 - -
Pumo9g01683 406 FunFam Fasciclin-like arabinogalactan protein 2 22 164 - -
Pumo9g01683 406 Gene3D FAS1 domain 163 326 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01683 Pumo-Chr9 45942429 45944333 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01683 - - gmx:100805178 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01683 9 45942429 45944333 Pumo9g01683 9 45942429 45944333 ECH