Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01564 ATGAACAACTTGGAGTCCTACCCTCCCATTCTCCGCACCATTAGCCACCACCACCACCCAATAGATCACCATGACGACGACAACAACGACAACGACGACCCGATCCATGAGGATCCGGATCCCCTACCAGTTATAGATCTTCAAAGCTTAACCCATGACATGAACAAGCTTGAAGAGGGTTGCAAGCATTGGGGTTTGTTCCGTTTGGTTAACCATGGTGTTCCATCAACCCTATTGACCCAACTTCATGACCAAGCCAAACAACTCTTCTCTCTTTCCTTTGAGTCCAAACAGGCCTCATGTAGTGCCAATCCCGTCACTTACTTTTGGGGCACCCCTGCCCTTACTCCATCCGGGACAGCCCTAACAAAGGACCCCCAAAATATCAACTGGGTTGAAGGTTTCAATATGCCTTTGGGTCAGCTCTCCCAATTTCAATCTCAACTTCCTGAGCTTCACTCTTTCAGACTTTTGCTAGTGGAATATGGAGAACATTTGACCAGAATTGCTACAACTTTATTCGAAGCTATGGTGAAGAACCTTGACCTGAACTTTATACCATCTAGTTCCTACGTAGCAGAAAGCACGGGAATTGTGCGTGTTTATCGTTATCCAAATTGCTCTAACTCTAATGTTGTTGGTTTGGGAATGGAGGTGCATACAGATAGCTCAGTCTTGACCATATTGAACCAAGAAAATGAAGTGAGTGGACTTGAGGTGCTCAAAGATGATCAATGGCTGACTGTAAAACCCATTTCCAACACATTAATTGTCAATCTTGGTGACATGATGCAGGCAATAAGCGATGACAAATACAAAAGTGTGACACACAGAGTGAAGCTAAACAATCATAAAGAAAGGATCTCAATATGCTATTTTGTGTTCCCTGATGAAGACGTTGAGATTGAGAGCTCCAAGTACAGACCCTTCACTTATAATGAGTTTAGAGCACAAGTGCAACAAGACATCAAGACCGTAGGCCACAAAGTTGGGCTTGCAAGACCTCGGCTCCCATGCATGTCCGCTGCTAGTTGCCACTTCACCTCGACTGCTGCTTCCATTGCTGGCTCCCTGACCCCCCATGCATGTCACCTGCGAGTTTGCCACCGCTGGCTTCCTCGCCTGCTAGCAAGATCTACGTCCTCGGCGGCTGTGTCGCTGACACCTGGGCCCACCCTGCCAACTGAGCTAAGGTCCTCAAATCCCCGAGTTAGCTACATTAAAGCCTAA 1230 0.4691 MNNLESYPPILRTISHHHHPIDHHDDDNNDNDDPIHEDPDPLPVIDLQSLTHDMNKLEEGCKHWGLFRLVNHGVPSTLLTQLHDQAKQLFSLSFESKQASCSANPVTYFWGTPALTPSGTALTKDPQNINWVEGFNMPLGQLSQFQSQLPELHSFRLLLVEYGEHLTRIATTLFEAMVKNLDLNFIPSSSYVAESTGIVRVYRYPNCSNSNVVGLGMEVHTDSSVLTILNQENEVSGLEVLKDDQWLTVKPISNTLIVNLGDMMQAISDDKYKSVTHRVKLNNHKERISICYFVFPDEDVEIESSKYRPFTYNEFRAQVQQDIKTVGHKVGLARPRLPCMSAASCHFTSTAASIAGSLTPHACHLRVCHRWLPRLLARSTSSAAVSLTPGPTLPTELRSSNPRVSYIKA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01564 409 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 42 318 - -
Pumo9g01564 409 PRINTS Isopenicillin N synthase signature 57 74 - -
Pumo9g01564 409 PRINTS Isopenicillin N synthase signature 220 241 - -
Pumo9g01564 409 PRINTS Isopenicillin N synthase signature 256 282 - -
Pumo9g01564 409 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 192 296 IPR005123 -
Pumo9g01564 409 MobiDBLite consensus disorder prediction 17 43 - -
Pumo9g01564 409 Gene3D - 11 317 IPR027443 -
Pumo9g01564 409 Pfam 2OG-Fe(II) oxygenase superfamily 201 296 IPR044861 -
Pumo9g01564 409 SUPERFAMILY Clavaminate synthase-like 34 320 - -
Pumo9g01564 409 Pfam non-haem dioxygenase in morphine synthesis N-terminal 42 137 IPR026992 -
Pumo9g01564 409 MobiDBLite consensus disorder prediction 17 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01564 Pumo-Chr9 43697811 43714814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01564 42 293 Glycosyltransferase AT5G59530 28.413 2.63e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01564 K04125 - gmx:100819244 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01564 9 43697811 43714814 Pumo9g01564 9 43697811 43714814 ECH