Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01477 ATGTGTAATCCCAAGCCATCTTCAGCATCTCCATTTCTGAGTCTCACAAAATCCCACCCCAAAGTTGTGTATCCTCCTTCCCCTGAATCTGATGATCAAGTTCAAGATGAATTGCACAGATGGCCTACTCTTAATGAGGCCATAGCAGAAATCAAGGCAATAGGGAGGGTATCAGGCCCAACAGCCATCACTGGATTACTCTTATATTCAAGAGCTATGATCTCTATGATTTTCCTTGGCTATCTTGGTGAGATGGAACTAGCAGGAGGGTCTCTCTCTATTGGTTTTGCCAACATCACTGGCTACTCTGTGATCTCTGGATTAGCCATGGGGATGGAACCAATTTGTGGACAAGCTTATGGAGCAAAGCAATGGAAGCTACTTGGCTTGACACTGCAGAGAACTGTTCTCCTCCTTCTCTCAACCTCTATTCCCATCTCATTCATGTGGCTCAACATGAAGAGATTCCTCTTGTGGTCAGGCCAAGACCAAGAAATAGCATCAGTAGCACAAACTTTCATCACTTTCTCTATACCTGACCTTTTCTTGCTCTCACTTCTCCACCCTCTAAGAATCTACCTCAGGACTCAAAGCATCACATTGCCACTGACATATTGCTCAGCCATCTCAGTTCTGCTCCATGTGCCTTTGAATTTCCTCCTAGTGGTTCACCTCAAGATGGGGATTGCTGGGGTGGCCACAGCAATGGTGCTAACTAACCTCAACCTCATTCTCTTCATCTCCTCCTCTGTGTACTTCTCTGGTGCACACAGGGCCTCATGGGTTCCCCCTAGTGTGGACTGCATCAAGGGGTGGTCCTCATTGCTATCACTTGCAATTCCAACTTGTGTCTCAGTTTGCCTAGAGTGGTGGTGGTATGAGTTCATGATAATGCTGTGTGGCCTTTTGGTGAATCCAAAAGCAACCATTGCTTCAATGGGGATCCTCATCCAAACAACCTCTTTGGTCTATGTGTTCCCATCATCACTCAGCCTTGGTGTTTCCACAAGGGTAGGGAATGAGTTAGGTGCAAACAATCCAAGAAAAGCAAGAGTGTCCATGATAGTGTCACTCTTTTGTGCTGTGGCTTTAGGCCTTGCAGCCATGCTATTCACCACCTTGATGAGGCACCAATGGGGCAGGTTCTTCACCAATGACCATGAGATTTTGGAACTCACATCACTGGTGCTCCCAATTGCTGGCCTCTGTGAGCTTGGGAACTGCCCTCAGACCACAGGCTGTGGAGTCCTGAGGGGCAGTGCAAGACCCACCATTGGTGCCAACATCAATTTGGGCTCATTCTACTTGGTGGGTATGCCAGTGGCTATCCTTCTGGGCTTTGTGGCCAAAATGGGGTTTGCAGGGCTCTGGCTTGGGTTGCTTGCAGCCCAAGCCTCATGTGCTGCCCTCATGCTCTATGTTCTTTGCACAACAGATTGGAATGTGCAAGTAGAAAGAGCTAAAGAACTCACAAAAACTTCAACAACAACTACTACTACCACTACCACTTGTTCTGCTGCTCCTGATTCTAACTCTAAATTGTTACCTACACACACCAAAAAAGAGGCTAACATGAACAAGAATGCTCATGCTTGTCTTCAAGAGATAGTTATTACTGGTGGTGGTGGTGATGAGCTTACCAAGATATCTTCACTTGAAACAGATCCACTGATCATTCCAACCACCAAACATACTCAAGTTTAG 1704 0.4654 MCNPKPSSASPFLSLTKSHPKVVYPPSPESDDQVQDELHRWPTLNEAIAEIKAIGRVSGPTAITGLLLYSRAMISMIFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKLLGLTLQRTVLLLLSTSIPISFMWLNMKRFLLWSGQDQEIASVAQTFITFSIPDLFLLSLLHPLRIYLRTQSITLPLTYCSAISVLLHVPLNFLLVVHLKMGIAGVATAMVLTNLNLILFISSSVYFSGAHRASWVPPSVDCIKGWSSLLSLAIPTCVSVCLEWWWYEFMIMLCGLLVNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRVGNELGANNPRKARVSMIVSLFCAVALGLAAMLFTTLMRHQWGRFFTNDHEILELTSLVLPIAGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAILLGFVAKMGFAGLWLGLLAAQASCAALMLYVLCTTDWNVQVERAKELTKTSTTTTTTTTTCSAAPDSNSKLLPTHTKKEANMNKNAHACLQEIVITGGGGDELTKISSLETDPLIIPTTKHTQV 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01477 567 CDD MATE_eukaryotic 50 486 IPR045069 GO:0042910|GO:1990961
Pumo9g01477 567 NCBIfam MATE family efflux transporter 66 457 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo9g01477 567 Pfam MatE 281 443 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo9g01477 567 Pfam MatE 60 220 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pumo9g01477 567 PANTHER MULTIDRUG RESISTANCE PROTEIN 46 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01477 Pumo-Chr9 42399126 42401395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01477 K03327 - gmx:100783792 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01477 9 42399126 42401395 Pumo9g01477 9 42399126 42401395 ECH