Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01409 ATGAGAGAGAACCATCCTTCGACAAACTCCGAGGACGACCACCGATCCTCCCTGCTGGATCTGGCGCGTGCCGAAATCACGGAATCCTCCAACTCCAAGACCCGAACCTGCGGCGGGTTCCCGGGTCCGGGTTCCGGGTCGGGCCCCTCCGAGCCTCAGGCCCCGTTCCCGGACCAGGTCCTGGAGAACGTCCTGGAGAACGTGCTCCATTTCCTCTCCTCGCGCCGCGACCGCAACGCCGCCTCATTGGTCTGCCGCTCCTGGTACCGTGCGGAGGCCCTCACCCGATCCGAGCTCTTCATCGGCAACTGCTACGCCCTCTCCCCCACTCGCGCCACCGCCCGCTTCACGCGCGTCAAGTCCGTCACCGTCAAGGGCAAGCCCCGCTTCGCCGACTTCGATCTGATGCCCCGCGACTGGGGGGCCCACTTCGCCCCTTGGGCCTCGGCTTTGGCCCAAGCCTACCCCTGGCTCGAAAAGCTCCACCTCAAGCGCATGTTAGTCACCGACGCCGACCTCGCCCTCCTCGCCGACTCCTTCTCCGGCTTCCGCGAACTCGTCCTCGTCTGCTGCGAGGGCTTCGGCACTCCCGGCCTCGCCACCGTCGCCGCCAAGTGCAGATTGCTGAGGGTGCTTGAGCTTGTGGAATCTGTGGTGGAGGTTGAGGACGATGAGGAAGTCGATTGGATTTCGTGTTTTCCCGAGAGTCAGACCAATATGGAGTCTCTCGTGTTTGATTGCGTTGAGGTTCCTATTAATTTCGAGGCTTTGGAGGGTTTAGTGGCTAGGTCGCCTCGGTTGAAGAAGCTTCGTTTGAACCGATTTGTTTCCATGGCTCAGCTCTCTCGTTTGCTGCTTCGAGCTCCGCAGCTTACTCACCTTGGAACGGGCTCCTTCAGTGCTACTGAGGCCGGGGCCGTTGGGGATCAGGAACCGGACTACGCGGCCGCGTTTCGAGGCTTGCAGATCCTTGGTTTGCCTGTCTGGATTCAGGGAGATTTGGGCGGATTACCTTCCGGCAATTTATCCGGTCTGCACGAATCTGACCTCGTTGAATTTGAGCTATGCTGA 1071 0.6088 MRENHPSTNSEDDHRSSLLDLARAEITESSNSKTRTCGGFPGPGSGSGPSEPQAPFPDQVLENVLENVLHFLSSRRDRNAASLVCRSWYRAEALTRSELFIGNCYALSPTRATARFTRVKSVTVKGKPRFADFDLMPRDWGAHFAPWASALAQAYPWLEKLHLKRMLVTDADLALLADSFSGFRELVLVCCEGFGTPGLATVAAKCRLLRVLELVESVVEVEDDEEVDWISCFPESQTNMESLVFDCVEVPINFEALEGLVARSPRLKKLRLNRFVSMAQLSRLLLRAPQLTHLGTGSFSATEAGAVGDQEPDYAAAFRGLQILGLPVWIQGDLGGLPSGNLSGLHESDLVEFELC 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01409 356 MobiDBLite consensus disorder prediction 23 38 - -
Pumo9g01409 356 MobiDBLite consensus disorder prediction 1 21 - -
Pumo9g01409 356 SUPERFAMILY RNI-like 135 298 - -
Pumo9g01409 356 Gene3D - 52 96 - -
Pumo9g01409 356 Gene3D Ribonuclease Inhibitor 97 344 IPR032675 -
Pumo9g01409 356 Pfam F-box 58 97 IPR041567 -
Pumo9g01409 356 SUPERFAMILY F-box domain 56 91 IPR036047 GO:0005515
Pumo9g01409 356 FunFam Transport inhibitor response 1-like protein 51 96 - -
Pumo9g01409 356 MobiDBLite consensus disorder prediction 1 57 - -
Pumo9g01409 356 CDD F-box_AtTIR1-like 58 96 - -
Pumo9g01409 356 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 137 295 - -
Pumo9g01409 356 Pfam Transport inhibitor response 1 protein domain 118 163 IPR041101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01409 Pumo-Chr9 41245165 41246400 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01409 - - gmx:100807836 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01409 9 41245165 41246400 Pumo9g01409 9 41245165 41246400 ECH