Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01341 ATGTCGACGCTGAAGGTGCCTCAACCTCTTCCCCCCGTTGCCGATGACTGTGAGCAGCTCCGGAAAGCCTTCGCAGGTTGGGGAACTAATGAGGGGCTGATTATATCGATCTTGGCTCATAGGAATGCTGCTCAAAGGAAGCTTATCAGAGAAACTTATGCCGAGACCTATGGAGAAGATCTCCTCAAGGCCTTGAACAAAGAACTCACGAGTGATTTTGAGAGGCTGGTTCATCTTTGGACACTTGATTCTGCTGAACGTGATGCAATTTTGGCAAATGAGGCAACTAAAAAGTGGACTTCCAGCAATCAGGTTCTGGTGGAAATAGCCTGCACCAGGTCCTCTGAACAATTGTTTGCTGTGAGGAAGGCTTACCATGTTCTTTATAAGAAGTCTCTTGAGGAGGATGTTGCTCATCACACAACAGGGGACTTCCGTAAGCTCATACTAGCCTCTGGTTAG 462 0.4762 MSTLKVPQPLPPVADDCEQLRKAFAGWGTNEGLIISILAHRNAAQRKLIRETYAETYGEDLLKALNKELTSDFERLVHLWTLDSAERDAILANEATKKWTSSNQVLVEIACTRSSEQLFAVRKAYHVLYKKSLEEDVAHHTTGDFRKLILASG 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01341 153 Gene3D Annexin 83 152 IPR037104 GO:0005509|GO:0005544
Pumo9g01341 153 PRINTS Annexin family signature 92 113 IPR001464 GO:0005509|GO:0005544
Pumo9g01341 153 PRINTS Annexin family signature 65 81 IPR001464 GO:0005509|GO:0005544
Pumo9g01341 153 PRINTS Annexin family signature 25 47 IPR001464 GO:0005509|GO:0005544
Pumo9g01341 153 SMART annex3 28 80 IPR018502 GO:0005509|GO:0005544
Pumo9g01341 153 SMART annex3 100 152 IPR018502 GO:0005509|GO:0005544
Pumo9g01341 153 FunFam Annexin 83 151 - -
Pumo9g01341 153 ProSiteProfiles Annexin repeat profile. 11 82 IPR018502 GO:0005509|GO:0005544
Pumo9g01341 153 ProSiteProfiles Annexin repeat profile. 83 153 IPR018502 GO:0005509|GO:0005544
Pumo9g01341 153 FunFam Annexin 1 82 - -
Pumo9g01341 153 Gene3D Annexin 1 82 IPR037104 GO:0005509|GO:0005544
Pumo9g01341 153 SUPERFAMILY Annexin 2 151 IPR037104 GO:0005509|GO:0005544
Pumo9g01341 153 PANTHER ANNEXIN 13 151 - -
Pumo9g01341 153 Pfam Annexin 16 78 IPR018502 GO:0005509|GO:0005544
Pumo9g01341 153 Pfam Annexin 88 151 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01341 Pumo-Chr9 39094026 39096489 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01341 K17098 - gmx:100784252 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01341 9 39094026 39096489 Pumo9g01341 9 39094026 39096489 ECH