Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01304 ATGCCTTATCAACTGTCATCTGGTGTGTGCATACCCCATGCAATTTCAGTTCAACCTAATACAAATCACAGCAGTTCCAAGTCTGACAGAGTGCGGAAAATTGGTGAGTTAAGGGCAATATCCATGCGAGAGTCTGATTATGCTCAGAGGAATCCACATGCAAGACTGATAAGACTTGGAATTGGTGATACTACAGAGCCAATACCAGACATCATAACTTCAGCTATGGCTAAGCAAGCATTGGCTCTGTCAACAGCTCAAGGCTATAAGGGTTATGGACCTGAGCAAGGCAACAGGGAGCTAAAGATGGCAATAGCAGAAACATTTTACCAACGTATGCAAGTGAAGGAAAATGAGATTTTTGTATCTGATGGAGCACAGTGTGATATTTCTCGCGTTCAGATGCTTCTGGACGCTAGTTTGTCAATAGCTGTGCAGGATCCAACTTTTCCGGGATACATAGATTCCAGTGTGATTGTTGGTAGGGCCGGAGGGTTCAAAGCAGGGAGTGGAAAGTACAAAAACATTGTGTACATGAAGTGTGGGCCTGAGAATGATTTCTTTCCAAACCTATCAATTACTCCAAGGACTGATTTGATTTTCTTTTGTTCTCCAAACAATCCAACTGGTAGTGCTGCATCTCGGCAGCAACTTGAGCAACTTGTGGAGTTTGCAAAAGCAAATGGATCTATCATCATTTATGACGCTGCTTATGCTGCTTACATATCAGATGAAAGCCCGAGATCAATTTTTGAAATTCCTGGAGCCAAAGAGGTGGTGGCAATTGAAATTTCATCATTTTCAAAATTTGCTGGTTTTACTGGTGTCCGGCTTGGCTGGACAGTTGTCCCTGAAGAGCTTTTGTATGCTAATGGTTATCCTATGATAAAGGATTATGATCGCATTGTTTGCACCTGCTTCAATGGTGCATCTAATATTGTTCAGGCTGGTGGACTTGCATGCCTTTCTCCACAAGGATTTCAGGTATATGGCGGCAAAAATGGGCCCTATGTATGGGTTCATTTTCCAGGGTTGAGTTCATGGGAAGTGTTCAACAAAATTCTTGACAGAGCAGCCATAGTCACTGTCCCTGGTATAGGATTTGGTCCTGGCGGTGAGGGGTATATTAGAGTCAGTGCCTTTGGTCACAGAGAATCTGTATTGGAAGCTTCAGGGAGATTGACAAAACTACTATAA 1197 0.4294 MPYQLSSGVCIPHAISVQPNTNHSSSKSDRVRKIGELRAISMRESDYAQRNPHARLIRLGIGDTTEPIPDIITSAMAKQALALSTAQGYKGYGPEQGNRELKMAIAETFYQRMQVKENEIFVSDGAQCDISRVQMLLDASLSIAVQDPTFPGYIDSSVIVGRAGGFKAGSGKYKNIVYMKCGPENDFFPNLSITPRTDLIFFCSPNNPTGSAASRQQLEQLVEFAKANGSIIIYDAAYAAYISDESPRSIFEIPGAKEVVAIEISSFSKFAGFTGVRLGWTVVPEELLYANGYPMIKDYDRIVCTCFNGASNIVQAGGLACLSPQGFQVYGGKNGPYVWVHFPGLSSWEVFNKILDRAAIVTVPGIGFGPGGEGYIRVSAFGHRESVLEASGRLTKLL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01304 398 CDD AAT_like 57 390 - -
Pumo9g01304 398 NCBIfam LL-diaminopimelate aminotransferase 40 327 IPR019942 GO:0008483
Pumo9g01304 398 PANTHER AMINOTRANSFERASE 39 327 IPR019942 GO:0008483
Pumo9g01304 398 Pfam Aminotransferase class I and II 56 288 IPR004839 GO:0009058|GO:0030170
Pumo9g01304 398 Gene3D - 66 322 IPR015421 GO:0003824
Pumo9g01304 398 SUPERFAMILY PLP-dependent transferases 43 394 IPR015424 -
Pumo9g01304 398 Gene3D Aspartate Aminotransferase, domain 1 39 65 IPR015422 GO:0003824
Pumo9g01304 398 Gene3D Aspartate Aminotransferase, domain 1 323 398 IPR015422 GO:0003824
Pumo9g01304 398 FunFam LL-diaminopimelate aminotransferase, chloroplastic 66 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01304 Pumo-Chr9 38457462 38464261 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01304 K10206 - qsu:112023739 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01304 9 38457462 38464261 Pumo9g01304 9 38457462 38464261 ECH