Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g01278 ATGCGCGAAGCGCTCGCGTGCGACGTCGCCGGCGCGCTGGCGTCTCCGTCGCCGCCGGTGGTGGTGACCGGCCGGAGCCGGTCGCAGGGCTTCACGCGGCGAGTGACGCCGGCGGCGCTGCCGGCGGCGTCGTCCGGATCGGCGGTGGAGCGCGTTCTCCCGAACGGCGACTTCTACGCCGGGAGCTTCTCCGGCAACGTCCCGCACGGATCGGGAAAGTACCTCTGGACGGACGGGTGCATGTACGAGGGCGAGTGGAAGCGCGGCAAGGCCTCGGGAAAGGGCAAATTCTCGTGGCCATCGGGCGCGACCTACGAGGGCGAGTTCAAATCGGGGCGCATGGAAGGCTTCGGAACCTTCGTCGGATCCGACGGCGACACCTACCGCGGCGCCTGGAGCTCCGACCGAAAGCACGGGTTCGGCCAGAAGCGCTACGCGAACGGGGACTTATACGAGGGCTGGTGGAAGCGCAACGTGCAGGACGGTCACGGCCGTTACGTCTGGAAGAACGGGAACGAGTACGTCGGGGAGTGGAAGAACGGCGTGATTAACGGCAAGGGAGCTCTGGTGTGGGCCAACGGAAACCGTTACGAGGGGCAGTGGGAGAACGGGGTCCCCAAGGGGCACGGCGTTATGAAGATTCAGCACCATTTGCTCTGGGGCGAGAATTTTAGCGTGAAACGGTTCTCCGTTGACGGAAGAGGGAGCGTTAATAATAACGATAAGAGTTTCCCCAGGATTTGTATTTGGGAGTCGGAGGGTGAAGCCGGTGACATCACGTGCGATATTATTGATAATGTGGAGGCGTCGATGTTTTACCGCGACGGAACGACGTCGGATTGTGAAGAGTTGCGGAGGAACCCTTGTTGTTTCTCTAGCGAAGTGAAGAGACCCGGGGAAACCATTTCAAAAGGGCATAAGAATTATGACTTGATGCTTAATCTGCAATTGGGAATAAGATACACTGTTGGGAAGAAGGCTTCGACGTTGCGGGAGCTTAAGCAGAGTGATTTTGATCCGAAGGAGAAGTTCTGGACTAGGTTTCCGACGGAGGGGTCGAAGATGACGCCGCCGCATCAGTCCGCGGAGTTTCGATGGAAGGATTACTGCCCTGTGGTTTTTAGGCATTTGAGGAAGCTGTTTCAGGTGGATCCTGCTGATTACATGTTGGCTATATGTGGGGATGATGCTCTCCGGGAGCTTTCGTCTCCTGGGAAAAGTGGAAGCATCTTCTACTTGACCCAGGATGATAGATTCATGATAAAGACAGTGAAGAAATCTGAAGTCAAGGTGCTTCTTCGGATGCTTCGGAGTTATTATCAACATGTGTCTCGATATGAGAATTCACTCGTGACGAAATTCTATGGGGTGCACTGTGTCAAGCCAATTGGAGGTCAGAAGATCCGGTTCATTGTGATGGGCAATCTTTTCTGCTCCGAATATCCAATTCATAGACGATTTGATTTGAAAGGATCTTCACATGGCCGCACCACAGATAAACCTGAGGAGGACATTGATGAAACAACCACCCTGAAGGACCTTGACCTTAACTTTGTTTTTCGTGTACAAAGAAATTGGTTCCAGGAACTCATCAAACAAATTGAGCTGGACTGCGAGTTCTTGGAAGCCGAGAAAATTATGGATTACAGTCTTTTGGTTGGCATTCATTTTCGTGATGATAATACGTGTGACAAAATGGGATTGTCACCTTTTCTTTTACGCACTGGCAATCGGGATTCTTATCAGAATGAAAAGTTGATGCGTGGTTATCGCTTTCTTGAAGCAGAGCTACAGGATAGAGATCGAGTTAAATCTGGAAGGAAATCATTAATCAGGCTAGGAGCCAATATACCTGCAAGAGCAGAGCGACTGGCCCGGAGGAGTGATTTCGATCAATACACCACTGTTGGAATCAGCCATTTGACCCCTTATCGCAGTGGGGAGACTTACGATGTCGTTCTATACTTTGGGATCATTGACATTTTGCAAGATTATGATATCAGCAAGAAGCTTGAGCATGCTTACAAGTCTTTGCAAGTTGACCCTACTTCAATTTCTGCTGTTGATCCAAAGCTCTACTCGAAGAGGTTTCGTGATTTTGTAGGGAGAATATTCATTGAAGAGAGGTAG 2130 0.5155 MREALACDVAGALASPSPPVVVTGRSRSQGFTRRVTPAALPAASSGSAVERVLPNGDFYAGSFSGNVPHGSGKYLWTDGCMYEGEWKRGKASGKGKFSWPSGATYEGEFKSGRMEGFGTFVGSDGDTYRGAWSSDRKHGFGQKRYANGDLYEGWWKRNVQDGHGRYVWKNGNEYVGEWKNGVINGKGALVWANGNRYEGQWENGVPKGHGVMKIQHHLLWGENFSVKRFSVDGRGSVNNNDKSFPRICIWESEGEAGDITCDIIDNVEASMFYRDGTTSDCEELRRNPCCFSSEVKRPGETISKGHKNYDLMLNLQLGIRYTVGKKASTLRELKQSDFDPKEKFWTRFPTEGSKMTPPHQSAEFRWKDYCPVVFRHLRKLFQVDPADYMLAICGDDALRELSSPGKSGSIFYLTQDDRFMIKTVKKSEVKVLLRMLRSYYQHVSRYENSLVTKFYGVHCVKPIGGQKIRFIVMGNLFCSEYPIHRRFDLKGSSHGRTTDKPEEDIDETTTLKDLDLNFVFRVQRNWFQELIKQIELDCEFLEAEKIMDYSLLVGIHFRDDNTCDKMGLSPFLLRTGNRDSYQNEKLMRGYRFLEAELQDRDRVKSGRKSLIRLGANIPARAERLARRSDFDQYTTVGISHLTPYRSGETYDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPTSISAVDPKLYSKRFRDFVGRIFIEER 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g01278 709 SMART PIPK_2 334 706 IPR002498 GO:0016307|GO:0046488
Pumo9g01278 709 SMART morn 57 78 IPR003409 -
Pumo9g01278 709 SMART morn 195 216 IPR003409 -
Pumo9g01278 709 SMART morn 149 170 IPR003409 -
Pumo9g01278 709 SMART morn 80 101 IPR003409 -
Pumo9g01278 709 SMART morn 103 124 IPR003409 -
Pumo9g01278 709 SMART morn 126 147 IPR003409 -
Pumo9g01278 709 SMART morn 172 193 IPR003409 -
Pumo9g01278 709 Gene3D - 112 156 - -
Pumo9g01278 709 Gene3D - 61 111 - -
Pumo9g01278 709 Gene3D - 157 220 - -
Pumo9g01278 709 Gene3D - 476 705 - -
Pumo9g01278 709 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 145 223 - -
Pumo9g01278 709 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 54 158 - -
Pumo9g01278 709 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 294 475 IPR027484 -
Pumo9g01278 709 FunFam Phosphatidylinositol 4-phosphate 5-kinase 89 133 - -
Pumo9g01278 709 PIRSF PIP5K_plant 215 709 IPR017163 GO:0005524|GO:0016308
Pumo9g01278 709 PIRSF PIP5K_plant 24 224 IPR017163 GO:0005524|GO:0016308
Pumo9g01278 709 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 393 703 IPR002498 GO:0016307|GO:0046488
Pumo9g01278 709 SUPERFAMILY SAICAR synthase-like 304 705 - -
Pumo9g01278 709 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 301 705 IPR002498 GO:0016307|GO:0046488
Pumo9g01278 709 CDD PIPKc_AtPIP5K_like 308 704 - -
Pumo9g01278 709 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 67 705 IPR023610 -
Pumo9g01278 709 Pfam MORN repeat 151 172 IPR003409 -
Pumo9g01278 709 Pfam MORN repeat 174 196 IPR003409 -
Pumo9g01278 709 Pfam MORN repeat 59 81 IPR003409 -
Pumo9g01278 709 Pfam MORN repeat 197 212 IPR003409 -
Pumo9g01278 709 Pfam MORN repeat 105 127 IPR003409 -
Pumo9g01278 709 Pfam MORN repeat 82 103 IPR003409 -
Pumo9g01278 709 Pfam MORN repeat 128 149 IPR003409 -
Pumo9g01278 709 FunFam Phosphatidylinositol 4-phosphate 5-kinase 294 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g01278 Pumo-Chr9 37835639 37840485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g01278 12 708 Acyl Lipid Metabolism Gene Families AT1G21980 73.370 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo9g01278 K00889 - gmx:100790632 1370.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g01278 9 37835639 37840485 Pumo9g01278 9 37835639 37840485 ECH